ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123428273	transcription factor bHLH112-like
osa-u.5	4337107	transcription factor bHLH112
osa-u.5	9271688	transcription factor bHLH112
zma-u.5	103653037	transcription factor bHLH112
zma-u.5	100502402	uncharacterized LOC100502402
zma-u.5	100383774	uncharacterized LOC100383774

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(404 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3241 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(229 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(276 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(590 genes)	IEA

Protein

XP_044968400.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_044968400.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044968400.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123428273	osa-u.5 for 4337107	osa-u.5 for 9271688	zma-u.5 for 103653037	zma-u.5 for 100502402	zma-u.5 for 100383774

Ortholog ID: 12757

Species

hvu

tae

bdi

osa

zma

sbi

Symbol

Function^*

transcription factor bHLH112

transcription factor bHLH112-like

transcription factor bHLH112

uncharacterized LOC100383774

uncharacterized LOC100286016

transcription factor bHLH112

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	7
hvu00270	Cysteine and methionine metabolism	4
hvu00670	One carbon pool by folate	4
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
hvu01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01240	Biosynthesis of cofactors	3
hvu00270	Cysteine and methionine metabolism	2
hvu00670	One carbon pool by folate	2
hvu00999	Biosynthesis of various plant secondary metabolites	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	3
sbi00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

123430913

123428273

123190587

123047266

100829711

100837038

9271688

4337107

100383774

100286016

8066851

8069684


Species	hvu	osa	zma	bdi	bra	gma	ath	ppo	sbi	ghi	sot	nta	cre	tae	mtr	vvi	cit	bna	sly
Paralog	1	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123428273 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123428273 (hvu-r.1 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123428273 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123428273 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**