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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123433975  protein GRAVITROPIC IN THE LIGHT 1 
 tae-r.2  123125107  protein GRAVITROPIC IN THE LIGHT 1 
 tae-r.2  123048312  protein GRAVITROPIC IN THE LIGHT 1 
 tae-r.2  123181179  protein GRAVITROPIC IN THE LIGHT 1 
 bdi-r.1  100822255  protein GRAVITROPIC IN THE LIGHT 1 
 osa-u.5  4349073  protein GRAVITROPIC IN THE LIGHT 1 
 zma-u.5  100275180  putative domain of unknown function (DUF641) containing family protein 
 zma-u.5  100275178  protein GRAVITROPIC IN THE LIGHT 1 
 sbi-r.1  8067065  uncharacterized LOC8067065 
 ath-u.5  AT3G60680  DUF641 family protein (DUF641) 
 gma-u.5  100796904  protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5  100783971  uncharacterized LOC100783971 
 sly-u.5  101266639  protein GRAVITROPIC IN THE LIGHT 1 
 bra-r.6  103841912  protein GRAVITROPIC IN THE LIGHT 1 
 vvi-u.5  100250589  protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5  7488884  protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5  7453957  protein GRAVITROPIC IN THE LIGHT 1 
 mtr-u.5  25480561  protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1  107930517  protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1  107930520  protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1  107920946  protein GRAVITROPIC IN THE LIGHT 1 
 bna-r.1  106411640  protein GRAVITROPIC IN THE LIGHT 1-like 
 bna-r.1  106416169  protein GRAVITROPIC IN THE LIGHT 1 
 cit-r.1  102614210  protein GRAVITROPIC IN THE LIGHT 1 
 nta-r.1  107815902  protein GRAVITROPIC IN THE LIGHT 1-like 
 nta-r.1  107785485  protein GRAVITROPIC IN THE LIGHT 1-like 

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Top 50 coexpressed genes to 123433975 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123433975 (hvu-r.1 coexpression data)

CoexMap"123433975"


hvuLOC123433975 | Entrez gene ID : 123433975
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna cit nta sot cre
Paralog 1 3 1 1 2 1 1 2 1 1 1 2 1 3 2 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009959 [list] [network] negative gravitropism  (8 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (38 genes)  IEA  
GO CC
GO MF
Protein XP_044971421.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  nucl_plas 1,  nucl 1,  mito 1  (predict for XP_044971421.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for XP_044971421.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123433975


tae-r.2
for
123125107


tae-r.2
for
123048312


tae-r.2
for
123181179


bdi-r.1
for
100822255


osa-u.5
for
4349073


zma-u.5
for
100275180


zma-u.5
for
100275178


sbi-r.1
for
8067065


ath-u.5
for
AT3G60680


gma-u.5
for
100796904


gma-u.5
for
100783971


sly-u.5
for
101266639


bra-r.6
for
103841912


vvi-u.5
for
100250589


ppo-u.5
for
7488884


ppo-u.5
for
7453957


mtr-u.5
for
25480561


ghi-r.1
for
107930517


ghi-r.1
for
107930520


ghi-r.1
for
107920946


bna-r.1
for
106411640


bna-r.1
for
106416169


cit-r.1
for
102614210


nta-r.1
for
107815902


nta-r.1
for
107785485



Ortholog ID: 8518
Species hvu tae tae tae bdi osa zma zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi ghi bna bna cit nta nta
Symbol LOC123433975 LOC123125107 LOC123048312 LOC123181179 LOC100822255 LOC4349073 LOC100275180 LOC100275178 LOC8067065 AT3G60680 LOC100796904 LOC100783971 LOC101266639 LOC103841912 LOC100250589 LOC7488884 LOC7453957 LOC25480561 LOC107930517 LOC107930520 LOC107920946 LOC106411640 LOC106416169 LOC102614210 LOC107815902 LOC107785485
Function* protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 putative domain of unknown function (DUF641) containing family protein protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC8067065 DUF641 family protein (DUF641) protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC100783971 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00232 Caffeine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00232 Caffeine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123433975 123125107 123048312 123181179 100822255 4349073 100275180 100275178 8067065 825239 100796904 100783971 101266639 103841912 100250589 7488884 7453957 25480561 107930517 107930520 107920946 106411640 106416169 102614210 107815902 107785485
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