ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123437194	uncharacterized LOC123437194
tae-r.2	123126843	uncharacterized LOC123126843
tae-r.2	123050994	uncharacterized LOC123050994
tae-r.2	123181520	uncharacterized LOC123181520
osa-u.5	4335189	uncharacterized LOC4335189
osa-u.5	9267538	uncharacterized LOC9267538
zma-u.5	100272722	uncharacterized LOC100272722
sbi-r.1	8086273	uncharacterized LOC8086273
gma-u.5	100807087	uncharacterized LOC100807087
gma-u.5	100786119	uncharacterized LOC100786119
sly-u.5	101254835	uncharacterized LOC101254835
vvi-u.5	100252352	uncharacterized LOC100252352
ppo-u.5	7493870	uncharacterized LOC7493870
mtr-u.5	25500178	uncharacterized LOC25500178
ghi-r.1	107901039	uncharacterized LOC107901039
ghi-r.1	107913322	uncharacterized LOC107913322
sot-r.1	102603779	uncharacterized LOC102603779
cit-r.1	102621032	uncharacterized LOC102621032
nta-r.1	107810320	uncharacterized LOC107810320
nta-r.1	107818245	uncharacterized LOC107818245

Annotation

functional annotation

KEGG

GO BP

GO:0000012 [list] [network] single strand break repair

(4 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3241 genes)

IEA

GO MF

GO:0003684 [list] [network] damaged DNA binding

(40 genes)

IEA

Protein

XP_044971626.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, nucl 4, cyto 1, E.R. 1, cyto_E.R. 1

(predict for XP_044971626.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044971626.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123437194	tae-r.2 for 123126843	tae-r.2 for 123050994	tae-r.2 for 123181520	osa-u.5 for 4335189	osa-u.5 for 9267538	zma-u.5 for 100272722	sbi-r.1 for 8086273	gma-u.5 for 100807087	gma-u.5 for 100786119	sly-u.5 for 101254835	vvi-u.5 for 100252352	ppo-u.5 for 7493870	mtr-u.5 for 25500178	ghi-r.1 for 107901039	ghi-r.1 for 107913322	sot-r.1 for 102603779	cit-r.1 for 102621032	nta-r.1 for 107810320	nta-r.1 for 107818245

Ortholog

Ortholog ID: 12371

Species

hvu

tae

osa

zma

sbi

gma

sly

vvi

ppo

mtr

ghi

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123437194

uncharacterized LOC123126843

uncharacterized LOC123050994

uncharacterized LOC123181520

uncharacterized LOC4335189

uncharacterized LOC9267538

uncharacterized LOC100272722

uncharacterized LOC8086273

uncharacterized LOC100807087

uncharacterized LOC100786119

uncharacterized LOC101254835

uncharacterized LOC100252352

uncharacterized LOC7493870

uncharacterized LOC25500178

uncharacterized LOC107901039

uncharacterized LOC107913322

uncharacterized LOC102603779

uncharacterized LOC102621032

uncharacterized LOC107810320

uncharacterized LOC107818245

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	4
tae03082	ATP-dependent chromatin remodeling	2
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	4
tae03018	RNA degradation	3
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	2
osa04120	Ubiquitin mediated proteolysis	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr03040	Spliceosome	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	6
ghi03440	Homologous recombination	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	8
ghi03440	Homologous recombination	2
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

123437194

123126843

123050994

123181520

4335189

9267538

100272722

8086273

100807087

100786119

101254835

100252352

7493870

25500178

107901039

107913322

102603779

102621032

107810320

107818245

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123437194 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123437194 (hvu-r.1 coexpression data)


Species	hvu	tae	osa	zma	sbi	gma	sly	vvi	ppo	mtr	ghi	sot	cit	nta	bdi	bna	cre	ath	bra
Paralog	1	3	2	1	1	2	1	1	1	1	2	1	1	2	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123437194 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123437194 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**