ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123439892	uncharacterized LOC123439892
hvu-r.1	123429405	uncharacterized LOC123429405
hvu-r.1	123453171	uncharacterized LOC123453171
tae-r.2	123058345	uncharacterized LOC123058345
tae-r.2	123065403	uncharacterized LOC123065403
tae-r.2	123074509	uncharacterized LOC123074509
bdi-r.1	100839633	uncharacterized LOC100839633
bdi-r.1	100838787	uncharacterized LOC100838787
osa-u.5	4344364	uncharacterized LOC4344364
osa-u.5	4332582	uncharacterized LOC4332582
osa-u.5	4326341	uncharacterized LOC4326341
zma-u.5	103639235	uncharacterized LOC103639235
zma-u.5	100277630	uncharacterized LOC100277630
zma-u.5	100277467	DUF3511 domain protein
sbi-r.1	8078193	uncharacterized LOC8078193
sbi-r.1	110430456	uncharacterized LOC110430456
ath-u.5	AT2G19460	DUF3511 domain protein (DUF3511)
ath-u.5	AT3G13910	hypothetical protein (DUF3511)
gma-u.5	100818486	uncharacterized LOC100818486
gma-u.5	100799273	uncharacterized LOC100799273
bra-r.6	103850805	uncharacterized LOC103850805
bra-r.6	103846677	uncharacterized LOC103846677
vvi-u.5	104878982	uncharacterized LOC104878982
vvi-u.5	100266443	uncharacterized LOC100266443
ppo-u.5	7478174	uncharacterized LOC7478174
mtr-u.5	11430698	uncharacterized LOC11430698
mtr-u.5	11429868	uncharacterized LOC11429868
mtr-u.5	25481992	uncharacterized LOC25481992
ghi-r.1	121231955	uncharacterized LOC121231955
ghi-r.1	107931618	uncharacterized LOC107931618
ghi-r.1	107932212	uncharacterized LOC107932212
bna-r.1	BNAC03G38210D	uncharacterized BNAC03G38210D
bna-r.1	106394455	uncharacterized LOC106394455
bna-r.1	BNAC07G48510D	uncharacterized BNAC07G48510D
sot-r.1	102586099	uncharacterized LOC102586099
sot-r.1	102593175	uncharacterized LOC102593175
sot-r.1	102597557	uncharacterized LOC102597557
cit-r.1	102618796	hypothetical protein
cit-r.1	102625735	hypothetical protein
cit-r.1	102623546	uncharacterized LOC102623546
nta-r.1	142175797	uncharacterized LOC142175797
nta-r.1	107761458	uncharacterized LOC107761458

Top 50 coexpressed genes to 123439892 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123439892 (hvu-r.1 coexpression data)

CoexMap"123439892"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044972450.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 3, vacu 3, extr 1, cyto_nucl 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1

(predict for XP_044972450.1)

Subcellular
localization
TargetP

other 2

(predict for XP_044972450.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123439892	hvu-r.1 for 123429405	hvu-r.1 for 123453171	tae-r.2 for 123058345	tae-r.2 for 123065403	tae-r.2 for 123074509	bdi-r.1 for 100839633	bdi-r.1 for 100838787	osa-u.5 for 4344364	osa-u.5 for 4332582	osa-u.5 for 4326341	zma-u.5 for 103639235	zma-u.5 for 100277630	zma-u.5 for 100277467	sbi-r.1 for 8078193	sbi-r.1 for 110430456	ath-u.5 for AT2G19460	ath-u.5 for AT3G13910	gma-u.5 for 100818486	gma-u.5 for 100799273	bra-r.6 for 103850805	bra-r.6 for 103846677	vvi-u.5 for 104878982	vvi-u.5 for 100266443	ppo-u.5 for 7478174	mtr-u.5 for 11430698	mtr-u.5 for 11429868	mtr-u.5 for 25481992	ghi-r.1 for 121231955	ghi-r.1 for 107931618	ghi-r.1 for 107932212	bna-r.1 for BNAC03G38210D	bna-r.1 for 106394455	bna-r.1 for BNAC07G48510D	sot-r.1 for 102586099	sot-r.1 for 102593175	sot-r.1 for 102597557	cit-r.1 for 102618796	cit-r.1 for 102625735	cit-r.1 for 102623546	nta-r.1 for 142175797	nta-r.1 for 107761458

Ortholog

Ortholog ID: 616

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

bra

vvi

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123439892

uncharacterized LOC123429405

uncharacterized LOC123065403

uncharacterized LOC123040534

uncharacterized LOC123085643

uncharacterized LOC100838787

uncharacterized LOC112269736

uncharacterized LOC4344364

uncharacterized LOC4332582

uncharacterized LOC4323913

uncharacterized LOC103639235

uncharacterized LOC100277630

uncharacterized LOC100275329

uncharacterized LOC8078193

uncharacterized LOC8081093

DUF3511 domain protein (DUF3511)

ABC family ABC transporter, putative (DUF3511)

uncharacterized LOC100305934

uncharacterized LOC100305940

uncharacterized LOC102668315

uncharacterized LOC103846677

uncharacterized LOC104878982

uncharacterized LOC100267009

uncharacterized LOC11430698

uncharacterized LOC25481992

uncharacterized LOC11407646

uncharacterized LOC107932212

uncharacterized LOC107915043

uncharacterized LOC107906092

uncharacterized LOC125578512

uncharacterized BNAA03G03720D

uncharacterized LOC102586099

uncharacterized LOC102593175

uncharacterized LOC102597557

hypothetical protein

uncharacterized LOC102623546

uncharacterized LOC142175797

uncharacterized LOC107761458

uncharacterized LOC142182237

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00280	Valine, leucine and isoleucine degradation	4
hvu00071	Fatty acid degradation	3
hvu00592	alpha-Linolenic acid metabolism	3
hvu01212	Fatty acid metabolism	3
hvu04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	3
tae03420	Nucleotide excision repair	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa04145	Phagosome	3
osa03013	Nucleocytoplasmic transport	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04130	SNARE interactions in vesicular transport	2
zma04146	Peroxisome	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	4
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	4
vvi04144	Endocytosis	3
vvi04130	SNARE interactions in vesicular transport	2
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	11
ghi03008	Ribosome biogenesis in eukaryotes	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	3
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	6
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	4
sot04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	5
cit00941	Flavonoid biosynthesis	2
cit00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00051	Fructose and mannose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	4
nta00565	Ether lipid metabolism	4
nta04144	Endocytosis	4
nta00330	Arginine and proline metabolism	2
nta00410	beta-Alanine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

123439892

123429405

123065403

123040534

123085643

100838787

112269736

4344364

4332582

4323913

103639235

100277630

100275329

8078193

8081093

816465

825438

831070

100305934

100305940

102668315

103846677

104878982

100267009

11430698

25481992

11407646

107932212

107915043

107906092

125578512

106419991

102586099

102593175

102597557

102618796

102625735

102623546

142175797

107761458

142182237

The preparation time of this page was 0.4 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	sly
Paralog	3	3	2	3	3	2	2	2	2	2	1	3	3	3	3	3	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123439892 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123439892 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**