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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123440428   RING-H2 finger protein ATL74-like 
 hvu-r.1   123446226   RING-H2 finger protein ATL74-like 
 tae-r.2   123086462   RING-H2 finger protein ATL74 
 tae-r.2   123091532   RING-H2 finger protein ATL74 
 tae-r.2   123096491   RING-H2 finger protein ATL74 
 bdi-r.1   104584644   RING-H2 finger protein ATL74 
 osa-u.5   107278369   RING-H2 finger protein ATL74 
 osa-u.5   4327616   RING-H2 finger protein ATL74 
 osa-u.5   4349606   RING-H2 finger protein ATL74-like 
 zma-u.5   103640726   RING-H2 finger protein ATL74 
 sbi-r.1   8067180   RING-H2 finger protein ATL74 
 ath-u.5   AT3G10910   RING/U-box superfamily protein 
 ath-u.5   AT5G01880   RING/U-box superfamily protein 
 gma-u.5   100814602   RING-H2 finger protein ATL74 
 gma-u.5   100810195   RING-H2 finger protein ATL74 
 gma-u.5   100808245   RING-H2 finger protein ATL74 
 sly-u.5   101255204   RING-H2 finger protein ATL74 
 bra-r.6   103847239   RING-H2 finger protein ATL72 
 bra-r.6   103850400   RING-H2 finger protein ATL74 
 vvi-u.5   100251758   RING-H2 finger protein ATL74 
 vvi-u.5   100248379   RING-H2 finger protein ATL74 
 vvi-u.5   100243283   RING-H2 finger protein ATL74 
 ppo-u.5   7472472   RING-H2 finger protein ATL74 
 ppo-u.5   7464732   RING-H2 finger protein ATL74 
 mtr-u.5   25489830   RING-H2 finger protein ATL74-like 
 mtr-u.5   11432082   RING-H2 finger protein ATL74 
 ghi-r.1   107962372   RING-H2 finger protein ATL73 
 ghi-r.1   107896817   RING-H2 finger protein ATL74 
 bna-r.1   125581368   RING-H2 finger protein ATL74 
 bna-r.1   111211388   RING-H2 finger protein ATL74 
 bna-r.1   106417747   RING-H2 finger protein ATL72-like 
 sot-r.1   102581573   RING-H2 finger protein ATL74-like 
 cit-r.1   102613784   RING-H2 finger protein ATL74 
 cit-r.1   102625542   RING-H2 finger protein ATL74 
 nta-r.1   107768285   RING-H2 finger protein ATL74-like 
 nta-r.1   107783810   RING-H2 finger protein ATL74 

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Top 50 coexpressed genes to 123440428 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123440428 (hvu-r.1 coexpression data)

CoexMap"123440428"


hvuLOC123440428 | Entrez gene ID : 123440428    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 3 1 1 2 3 1 2 3 2 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044972928.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  extr 1  (predict for XP_044972928.1)
Subcellular
localization
TargetP
other 6  (predict for XP_044972928.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123440428
hvu-r.1
for
123446226
tae-r.2
for
123086462
tae-r.2
for
123091532
tae-r.2
for
123096491
bdi-r.1
for
104584644
osa-u.5
for
107278369
osa-u.5
for
4327616
osa-u.5
for
4349606
zma-u.5
for
103640726
sbi-r.1
for
8067180
ath-u.5
for
AT3G10910
ath-u.5
for
AT5G01880
gma-u.5
for
100814602
gma-u.5
for
100810195
gma-u.5
for
100808245
sly-u.5
for
101255204
bra-r.6
for
103847239
bra-r.6
for
103850400
vvi-u.5
for
100251758
vvi-u.5
for
100248379
vvi-u.5
for
100243283
ppo-u.5
for
7472472
ppo-u.5
for
7464732
mtr-u.5
for
25489830
mtr-u.5
for
11432082
ghi-r.1
for
107962372
ghi-r.1
for
107896817
bna-r.1
for
125581368
bna-r.1
for
111211388
bna-r.1
for
106417747
sot-r.1
for
102581573
cit-r.1
for
102613784
cit-r.1
for
102625542
nta-r.1
for
107768285
nta-r.1
for
107783810


Ortholog ID: 2721
Species hvu hvu tae tae tae bdi osa osa osa zma sbi ath ath gma gma gma sly bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi bna bna bna sot cit cit nta nta
Symbol LOC123440428 LOC123446226 LOC123086462 LOC123091532 LOC123096491 LOC104584644 LOC107278369 LOC4327616 LOC4349606 LOC103640726 LOC8067180 AT3G10910 AT5G01880 LOC100814602 LOC100808245 LOC100787273 LOC101255204 LOC103847239 LOC103850400 LOC100251758 LOC100248379 LOC100243283 LOC7472472 LOC7464732 LOC7455234 LOC25489830 LOC11432082 LOC107962372 LOC107914534 LOC125581368 LOC106417747 LOC106431784 LOC102581573 LOC102613784 LOC102625542 LOC107783810 LOC107794582
Function* RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING/U-box superfamily protein RING/U-box superfamily protein RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL72 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL73 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL72-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma01230 Biosynthesis of amino acids 3
zma00195 Photosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00030 Pentose phosphate pathway 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi00910 Nitrogen metabolism 2
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 4
ath00941 Flavonoid biosynthesis 3
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
ath00071 Fatty acid degradation 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 4
gma01200 Carbon metabolism 4
gma04146 Peroxisome 3
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00062 Fatty acid elongation 3
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
sly04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 7
bra00941 Flavonoid biosynthesis 4
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
bra00360 Phenylalanine metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00062 Fatty acid elongation 3
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04145 Phagosome 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
sot04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123440428 123446226 123086462 123091532 123096491 104584644 107278369 4327616 4349606 103640726 8067180 820261 831691 100814602 100808245 100787273 101255204 103847239 103850400 100251758 100248379 100243283 7472472 7464732 7455234 25489830 11432082 107962372 107914534 125581368 106417747 106431784 102581573 102613784 102625542 107783810 107794582
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