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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123406333   uncharacterized LOC123406333 
 hvu-r.1   123445219   E3 ubiquitin-protein ligase COP1-like 
 hvu-r.1   123411186   E3 ubiquitin-protein ligase RNF4-like 
 bdi-r.1   100823183   E3 ubiquitin-protein ligase RNF4 
 bdi-r.1   100839348   E3 ubiquitin-protein ligase RNF4 
 bdi-r.1   100845167   E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 
 osa-u.5   107276681   uncharacterized LOC107276681 
 osa-u.5   4347500   E3 ubiquitin-protein ligase RNF4 
 osa-u.5   4324365   uncharacterized LOC4324365 
 zma-u.5   100194198   RING/U-box superfamily protein 
 zma-u.5   100502508   RING/U-box superfamily protein 
 zma-u.5   100282619   ubiquitin-protein ligase/ zinc ion binding protein 
 sbi-r.1   8058967   E3 ubiquitin-protein ligase RNF4 
 sbi-r.1   8059363   E3 ubiquitin-protein ligase RNF4 
 ath-u.5   AT3G07200   RING/U-box superfamily protein 
 ath-u.5   AT5G48655   RING/U-box superfamily protein 
 gma-u.5   100792853   E3 ubiquitin-protein ligase RNF4 
 gma-u.5   100778432   E3 ubiquitin-protein ligase RNF4 
 gma-u.5   100306616   uncharacterized LOC100306616 
 sly-u.5   101256594   uncharacterized LOC101256594 
 sly-u.5   101249295   uncharacterized LOC101249295 
 bra-r.6   103854551   E3 ubiquitin-protein ligase RNF4 
 bra-r.6   103837260   E3 ubiquitin-protein ligase RNF4 
 vvi-u.5   100262402   uncharacterized LOC100262402 
 vvi-u.5   100246586   uncharacterized LOC100246586 
 ppo-u.5   18096550   uncharacterized LOC18096550 
 ppo-u.5   7463430   uncharacterized LOC7463430 
 mtr-u.5   25492825   E3 ubiquitin-protein ligase RNF4 
 ghi-r.1   107954683   E3 ubiquitin-protein ligase RNF4 
 ghi-r.1   121219555   E3 ubiquitin-protein ligase RNF4 
 ghi-r.1   107955252   E3 ubiquitin-protein ligase RNF4 
 bna-r.1   106348908   probable E3 ubiquitin-protein ligase DTX3 
 bna-r.1   106349004   probable E3 ubiquitin-protein ligase DTX3 
 bna-r.1   106365804   E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 
 sot-r.1   102601266   E3 ubiquitin-protein ligase RNF4-like 
 cit-r.1   102621355   E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like 
 cit-r.1   102607650   uncharacterized LOC102607650 
 nta-r.1   107827757   uncharacterized LOC107827757 
 nta-r.1   107816416   uncharacterized LOC107816416 
 nta-r.1   107805214   uncharacterized LOC107805214 

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Top 50 coexpressed genes to 123406333 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123406333 (hvu-r.1 coexpression data)

CoexMap"123440698"


hvuLOC123440698 | Entrez gene ID : 123440698    
Species hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre tae
Paralog 3 3 3 3 2 2 3 2 2 2 2 1 3 3 1 2 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044973188.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044973188.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_044973188.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123406333
hvu-r.1
for
123445219
hvu-r.1
for
123411186
bdi-r.1
for
100823183
bdi-r.1
for
100839348
bdi-r.1
for
100845167
osa-u.5
for
107276681
osa-u.5
for
4347500
osa-u.5
for
4324365
zma-u.5
for
100194198
zma-u.5
for
100502508
zma-u.5
for
100282619
sbi-r.1
for
8058967
sbi-r.1
for
8059363
ath-u.5
for
AT3G07200
ath-u.5
for
AT5G48655
gma-u.5
for
100792853
gma-u.5
for
100778432
gma-u.5
for
100306616
sly-u.5
for
101256594
sly-u.5
for
101249295
bra-r.6
for
103854551
bra-r.6
for
103837260
vvi-u.5
for
100262402
vvi-u.5
for
100246586
ppo-u.5
for
18096550
ppo-u.5
for
7463430
mtr-u.5
for
25492825
ghi-r.1
for
107954683
ghi-r.1
for
121219555
ghi-r.1
for
107955252
bna-r.1
for
106348908
bna-r.1
for
106349004
bna-r.1
for
106365804
sot-r.1
for
102601266
cit-r.1
for
102621355
cit-r.1
for
102607650
nta-r.1
for
107827757
nta-r.1
for
107816416
nta-r.1
for
107805214


Ortholog ID: 1384
Species hvu tae tae tae bdi bdi bdi osa osa osa zma zma zma sbi sbi ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta nta
Symbol LOC123399707 LOC123063087 LOC123104288 LOC100682522 LOC100823183 LOC100845167 LOC104583742 LOC107276681 LOC4347500 LOC4324365 LOC100194198 LOC100502508 LOC100282619 LOC8058967 LOC8059363 AT3G07200 AT5G48655 LOC100792853 LOC100778432 LOC100306616 LOC101256594 LOC101249295 LOC103854551 LOC103837260 LOC103874974 LOC100262402 LOC100246586 LOC18096550 LOC7463430 LOC25492825 LOC112416066 LOC107955252 LOC107924480 LOC107912555 LOC106348908 LOC106365804 LOC106410811 LOC102601266 LOC102621355 LOC102607650 LOC107827757 LOC107816416 LOC107805214
Function* E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8-like E3 ubiquitin-protein ligase BRE1A E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase BRE1A E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 E3 ubiquitin-protein ligase RNF4 uncharacterized LOC107276681 E3 ubiquitin-protein ligase RNF4 uncharacterized LOC4324365 RING/U-box superfamily protein RING/U-box superfamily protein ubiquitin-protein ligase/ zinc ion binding protein E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4 uncharacterized LOC100306616 uncharacterized LOC101256594 uncharacterized LOC101249295 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4 probable E3 ubiquitin-protein ligase DTX3 uncharacterized LOC100262402 uncharacterized LOC100246586 uncharacterized LOC18096550 uncharacterized LOC7463430 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF8 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4 probable E3 ubiquitin-protein ligase DTX3 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 E3 ubiquitin-protein ligase RNF4 E3 ubiquitin-protein ligase RNF4-like E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like uncharacterized LOC102607650 uncharacterized LOC107827757 uncharacterized LOC107816416 uncharacterized LOC107805214
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
bdi04120 Ubiquitin mediated proteolysis 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa04148 Efferocytosis 3
osa04130 SNARE interactions in vesicular transport 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04075 Plant hormone signal transduction 2
zma03022 Basal transcription factors 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma04144 Endocytosis 2
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03040 Spliceosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04120 Ubiquitin mediated proteolysis 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 6
mtr04120 Ubiquitin mediated proteolysis 3
mtr03083 Polycomb repressive complex 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi04144 Endocytosis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123399707 123063087 123104288 100682522 100823183 100845167 104583742 107276681 4347500 4324365 100194198 100502508 100282619 8058967 8059363 819908 834923 100792853 100778432 100306616 101256594 101249295 103854551 103837260 103874974 100262402 100246586 18096550 7463430 25492825 112416066 107955252 107924480 107912555 106348908 106365804 106410811 102601266 102621355 102607650 107827757 107816416 107805214
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