ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123441089	pre-mRNA-splicing factor cwf23-like
osa-u.5	4331546	pre-mRNA-splicing factor cwf23
zma-u.5	100284067	uncharacterized LOC100284067
ath-u.5	AT5G23590	DNAJ heat shock N-terminal domain-containing protein
gma-u.5	100793225	dnaJ homolog subfamily C member 17
gma-u.5	100792307	dnaJ homolog subfamily C member 17
sly-u.5	101254367	uncharacterized LOC101254367
sly-u.5	101249579	uncharacterized LOC101249579
vvi-u.5	100261697	uncharacterized LOC100261697
ppo-u.5	7472102	uncharacterized LOC7472102
mtr-u.5	25485639	dnaJ homolog subfamily C member 17

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(1359 genes)

IEA

Protein

XP_044973550.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 2

(predict for XP_044973550.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044973550.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123441089	osa-u.5 for 4331546	zma-u.5 for 100284067	ath-u.5 for AT5G23590	gma-u.5 for 100793225	gma-u.5 for 100792307	sly-u.5 for 101254367	sly-u.5 for 101249579	vvi-u.5 for 100261697	ppo-u.5 for 7472102	mtr-u.5 for 25485639

Ortholog ID: 7348

Species

hvu

bdi

osa

zma

sbi

ath

gma

sly

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

pre-mRNA-splicing factor cwf23-like

dnaJ homolog subfamily C member 17

pre-mRNA-splicing factor cwf23

uncharacterized LOC100284067

dnaJ homolog subfamily C member 17

DNAJ heat shock N-terminal domain-containing protein

dnaJ homolog subfamily C member 17

uncharacterized LOC101249579

uncharacterized LOC101254367

uncharacterized LOC100261697

uncharacterized LOC7472102

dnaJ homolog subfamily C member 17

uncharacterized LOC102618077

uncharacterized LOC107766431

uncharacterized LOC107770533

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00020	Citrate cycle (TCA cycle)	2
sbi00270	Cysteine and methionine metabolism	2
sbi00566	Sulfoquinovose metabolism	2
sbi00620	Pyruvate metabolism	2
sbi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2
cit03082	ATP-dependent chromatin remodeling	2
cit03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03013	Nucleocytoplasmic transport	4
nta03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	5
nta03015	mRNA surveillance pathway	5
nta03040	Spliceosome	5
nta03008	Ribosome biogenesis in eukaryotes	2
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

123441089

100843202

4331546

100284067

8085527

832425

100793225

100792307

101249579

101254367

100261697

7472102

25485639

107947320

107922411

106348317

111207607

102590794

102618077

107766431

107770533

5718164

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123441089 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123441089 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	1	1	2	2	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123441089 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123441089 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**