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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123444486   protein RETARDED ROOT GROWTH, mitochondrial-like 
 hvu-r.1   123405457   uncharacterized LOC123405457 
 hvu-r.1   123424582   protein RETARDED ROOT GROWTH-LIKE 
 tae-r.2   123062151   protein RETARDED ROOT GROWTH, mitochondrial 
 tae-r.2   123051365   protein RETARDED ROOT GROWTH-LIKE 
 tae-r.2   123043498   protein RETARDED ROOT GROWTH-LIKE 
 bdi-r.1   100838661   uncharacterized LOC100838661 
 bdi-r.1   100830209   uncharacterized LOC100830209 
 osa-u.5   4326888   protein RETARDED ROOT GROWTH, mitochondrial 
 osa-u.5   4344398   protein RETARDED ROOT GROWTH, mitochondrial 
 zma-u.5   100194184   uncharacterized LOC100194184 
 zma-u.5   100382829   uncharacterized LOC100382829 
 sbi-r.1   8077531   uncharacterized LOC8077531 
 sbi-r.1   8072111   uncharacterized LOC8072111 
 ath-u.5   AT5G13610   sporulation RMD1-like protein, putative (DUF155) 
 ath-u.5   RRG   sporulation protein (DUF155) 
 gma-u.5   100792982   protein RETARDED ROOT GROWTH, mitochondrial 
 gma-u.5   100811261   protein RETARDED ROOT GROWTH-LIKE 
 gma-u.5   100815826   uncharacterized LOC100815826 
 sly-u.5   101252584   protein RETARDED ROOT GROWTH, mitochondrial 
 sly-u.5   101252383   protein RETARDED ROOT GROWTH-LIKE 
 bra-r.6   103831334   uncharacterized LOC103831334 
 bra-r.6   103846555   uncharacterized LOC103846555 
 vvi-u.5   100240981   protein RETARDED ROOT GROWTH-LIKE 
 vvi-u.5   100265119   protein RETARDED ROOT GROWTH, mitochondrial 
 ppo-u.5   7492905   protein RETARDED ROOT GROWTH, mitochondrial 
 ppo-u.5   7489619   protein RETARDED ROOT GROWTH-LIKE 
 ppo-u.5   7498198   protein RETARDED ROOT GROWTH, mitochondrial 
 mtr-u.5   25483211   protein RETARDED ROOT GROWTH-LIKE 
 mtr-u.5   11417380   protein RETARDED ROOT GROWTH, mitochondrial 
 ghi-r.1   107960331   protein RETARDED ROOT GROWTH, mitochondrial 
 ghi-r.1   107940797   protein RETARDED ROOT GROWTH-LIKE 
 ghi-r.1   107918270   protein RETARDED ROOT GROWTH-LIKE 
 bna-r.1   125588574   protein RETARDED ROOT GROWTH, mitochondrial-like 
 bna-r.1   106354065   protein RETARDED ROOT GROWTH, mitochondrial 
 bna-r.1   BNAC09G43480D   protein RETARDED ROOT GROWTH-LIKE 
 sot-r.1   102578930   sporulation protein RMD1 
 sot-r.1   102579102   uncharacterized LOC102579102 
 cit-r.1   102620927   hypothetical protein 
 cit-r.1   102627187   protein RETARDED ROOT GROWTH-LIKE 
 nta-r.1   107772191   protein RETARDED ROOT GROWTH, mitochondrial-like 
 nta-r.1   107819730   protein RETARDED ROOT GROWTH, mitochondrial 
 nta-r.1   107828758   protein RETARDED ROOT GROWTH-LIKE 

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Top 50 coexpressed genes to 123444486 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123444486 (hvu-r.1 coexpression data)

CoexMap"123444486"


hvuLOC123444486 | Entrez gene ID : 123444486    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 2 2 2 2 2 3 2 2 2 3 2 3 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_044977143.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  golg 2,  cyto 1,  golg_plas 1  (predict for XP_044977143.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_044977143.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123444486
hvu-r.1
for
123405457
hvu-r.1
for
123424582
tae-r.2
for
123062151
tae-r.2
for
123051365
tae-r.2
for
123043498
bdi-r.1
for
100838661
bdi-r.1
for
100830209
osa-u.5
for
4326888
osa-u.5
for
4344398
zma-u.5
for
100194184
zma-u.5
for
100382829
sbi-r.1
for
8077531
sbi-r.1
for
8072111
ath-u.5
for
AT5G13610
ath-u.5
for
RRG
gma-u.5
for
100792982
gma-u.5
for
100811261
gma-u.5
for
100815826
sly-u.5
for
101252584
sly-u.5
for
101252383
bra-r.6
for
103831334
bra-r.6
for
103846555
vvi-u.5
for
100240981
vvi-u.5
for
100265119
ppo-u.5
for
7492905
ppo-u.5
for
7489619
ppo-u.5
for
7498198
mtr-u.5
for
25483211
mtr-u.5
for
11417380
ghi-r.1
for
107960331
ghi-r.1
for
107940797
ghi-r.1
for
107918270
bna-r.1
for
125588574
bna-r.1
for
106354065
bna-r.1
for
BNAC09G43480D
sot-r.1
for
102578930
sot-r.1
for
102579102
cit-r.1
for
102620927
cit-r.1
for
102627187
nta-r.1
for
107772191
nta-r.1
for
107819730
nta-r.1
for
107828758


Ortholog ID: 2933
Species hvu hvu tae tae tae bdi bdi osa osa zma zma sbi sbi ath ath gma gma gma sly sly bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC123444486 LOC123424582 LOC123051365 LOC123079266 LOC123187310 LOC100838661 LOC100830209 LOC4326888 LOC4344398 LOC100194184 LOC100382829 LOC8077531 LOC8072111 AT5G13610 RRG LOC100792982 LOC100811261 LOC100815826 LOC101252584 LOC101252383 LOC103831334 LOC103846555 LOC100240981 LOC100265119 LOC7492905 LOC7489619 LOC7469773 LOC25483211 LOC11417380 LOC107960331 LOC107940797 LOC107893864 LOC125588574 LOC106354065 LOC125579051 LOC102578930 LOC102579102 LOC102620927 LOC102627187 LOC107772191 LOC107828758 LOC107829700
Function* protein RETARDED ROOT GROWTH, mitochondrial-like protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE uncharacterized LOC100838661 uncharacterized LOC100830209 protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH, mitochondrial uncharacterized LOC100194184 uncharacterized LOC100382829 uncharacterized LOC8077531 uncharacterized LOC8072111 sporulation RMD1-like protein, putative (DUF155) sporulation protein (DUF155) protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE uncharacterized LOC100815826 protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE uncharacterized LOC103831334 uncharacterized LOC103846555 protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH, mitochondrial-like protein RETARDED ROOT GROWTH, mitochondrial protein RETARDED ROOT GROWTH-LIKE-like sporulation protein RMD1 uncharacterized LOC102579102 hypothetical protein protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH, mitochondrial-like protein RETARDED ROOT GROWTH-LIKE protein RETARDED ROOT GROWTH-LIKE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00920 Sulfur metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
bdi01240 Biosynthesis of cofactors 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00470 D-Amino acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00240 Pyrimidine metabolism 2
ath00670 One carbon pool by folate 2
ath00790 Folate biosynthesis 2
ath01232 Nucleotide metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 7
ghi03013 Nucleocytoplasmic transport 5
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 3
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00920 Sulfur metabolism 2
nta01320 Sulfur cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123444486 123424582 123051365 123079266 123187310 100838661 100830209 4326888 4344398 100194184 100382829 8077531 8072111 831205 843270 100792982 100811261 100815826 101252584 101252383 103831334 103846555 100240981 100265119 7492905 7489619 7469773 25483211 11417380 107960331 107940797 107893864 125588574 106354065 125579051 102578930 102579102 102620927 102627187 107772191 107828758 107829700
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