ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123447866	60S ribosomal protein L10-1-like
osa-u.5	4337928	60S ribosomal protein L10-2-like
osa-u.5	4350098	60S ribosomal protein L10-1-like
zma-u.5	100282959	60S ribosomal protein L10-3
zma-u.5	542298	60S ribosomal protein L10-3
ath-u.5	RPL10B	Ribosomal protein L16p/L10e family protein
ath-u.5	SAC52	Ribosomal protein L16p/L10e family protein
ath-u.5	SAG24	senescence associated gene 24
gma-u.5	100779884	60S ribosomal protein L10
gma-u.5	100815571	60S ribosomal protein L10
gma-u.5	100305619	uncharacterized LOC100305619
sly-u.5	101263720	large ribosomal subunit protein uL16
sly-u.5	101264022	large ribosomal subunit protein uL16
sly-u.5	ACI29	60S ribosomal protein L10
vvi-u.5	100241995	large ribosomal subunit protein uL16
vvi-u.5	100262228	large ribosomal subunit protein uL16
ppo-u.5	7494652	60S ribosomal protein L10
mtr-u.5	11409699	60S ribosomal protein L10
mtr-u.5	25487737	60S ribosomal protein L10
mtr-u.5	25489847	60S ribosomal protein L10

Annotation

functional annotation

KEGG

hvg03010 [list] [network] Ribosome (15126 genes)

GO BP

GO:0000027 [list] [network] ribosomal large subunit assembly	(23 genes)	IEA
GO:0006412 [list] [network] translation	(594 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(134 genes)	IEA
GO:0005840 [list] [network] ribosome	(449 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(445 genes)

IEA

Protein

XP_044980508.1 [sequence] [blastp]
XP_044980509.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 3, chlo_mito 3, cyto 3, chlo 2, nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_044980508.1)
mito 4, chlo_mito 4, chlo 2, cyto 2, nucl 1	(predict for XP_044980509.1)

Subcellular
localization
TargetP

other 7, mito 6	(predict for XP_044980508.1)
other 7, mito 6	(predict for XP_044980509.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123447866	osa-u.5 for 4337928	osa-u.5 for 4350098	zma-u.5 for 100282959	zma-u.5 for 542298	ath-u.5 for RPL10B	ath-u.5 for SAC52	ath-u.5 for SAG24	gma-u.5 for 100779884	gma-u.5 for 100815571	gma-u.5 for 100305619	sly-u.5 for 101263720	sly-u.5 for 101264022	sly-u.5 for ACI29	vvi-u.5 for 100241995	vvi-u.5 for 100262228	ppo-u.5 for 7494652	mtr-u.5 for 11409699	mtr-u.5 for 25487737	mtr-u.5 for 25489847

Ortholog

Ortholog ID: 1947

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SAC52

RPL10B

Function^*

60S ribosomal protein L10-1-like

60S ribosomal protein L10-2

60S ribosomal protein L10

60S ribosomal protein L10-2

60S ribosomal protein L10

60S ribosomal protein L10-1

60S ribosomal protein L10-2-like

60S ribosomal protein L10-3

60S ribosomal protein L10

60S ribosomal protein L10-1

Ribosomal protein L16p/L10e family protein

60S ribosomal protein L10

large ribosomal subunit protein uL16

60S ribosomal protein L10-1

large ribosomal subunit protein uL16

60S ribosomal protein L10

60S ribosomal protein L10-3-like

60S ribosomal protein L10-like

60S ribosomal protein L10

large ribosomal subunit protein uL16

large ribosomal subunit protein uL16-like

ribosomal protein L10

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04144	Endocytosis	3
tae03015	mRNA surveillance pathway	3
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5
tae04120	Ubiquitin mediated proteolysis	3
tae03010	Ribosome	3
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17
sbi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	16
ath01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00906	Carotenoid biosynthesis	3
gma00592	alpha-Linolenic acid metabolism	2
gma00010	Glycolysis / Gluconeogenesis	2
gma00040	Pentose and glucuronate interconversions	2
gma00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	10
mtr00902	Monoterpenoid biosynthesis	3
mtr01240	Biosynthesis of cofactors	2
mtr00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	10
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	8
ghi03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6
bna00261	Monobactam biosynthesis	3
bna00300	Lysine biosynthesis	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	11
cit03040	Spliceosome	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	18

Expression

Expression pattern

Entrez Gene ID^*

123447866

123426547

123099935

542899

100840282

100823401

4337928

100282959

542298

8062999

8073823

837993

837036

100779884

100815571

101263720

101264022

103872125

100241995

100262228

7494652

11409699

25487737

107936005

107904859

106394929

106432562

102583043

102580084

102626628

102625379

107796739

107766087

5720023

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123447866 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123447866 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	2	3	3	3	2	1	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123447866 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123447866 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**