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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123451814   glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic 
 osa-u.5   4334020   glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic-like 
 osa-u.5   4326594   glucose-1-phosphate adenylyltransferase large subunit 2, cytosolic-like 
 osa-u.5   4339718   glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like 
 zma-u.5   542737   ADP-glucose pyrophosphorylase 
 zma-u.5   542072   ADP-glucose pyrophosphorylase small subunit 
 ath-u.5   APL3   Glucose-1-phosphate adenylyltransferase family protein 
 ath-u.5   APL4   Glucose-1-phosphate adenylyltransferase family protein 
 ath-u.5   APL1   ADP glucose pyrophosphorylase large subunit 1 
 gma-u.5   100798736   glucose-1-phosphate adenylyltransferase large subunit 1 
 gma-u.5   100808791   glucose-1-phosphate adenylyltransferase large subunit 1 
 gma-u.5   100799431   glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic 
 sly-u.5   agpL3   ADP-glucose pyrophosphorylase large subunit 
 sly-u.5   AgpL1   ADP-glucose pyrophosphorylase large subunit 
 vvi-u.5   100253688   glucose-1-phosphate adenylyltransferase large subunit 1 
 ppo-u.5   7456364   glucose-1-phosphate adenylyltransferase large subunit 1 
 ppo-u.5   7470001   glucose-1-phosphate adenylyltransferase large subunit 1 
 mtr-u.5   11417144   glucose-1-phosphate adenylyltransferase large subunit 1 
 mtr-u.5   25490207   glucose-1-phosphate adenylyltransferase large subunit 1 
 mtr-u.5   11418220   glucose-1-phosphate adenylyltransferase large subunit 1 

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Top 50 coexpressed genes to 123451814 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123451814 (hvu-r.1 coexpression data)

CoexMap"123451814"


hvuLOC123451814 | Entrez gene ID : 123451814    
Species hvu osa zma ath gma sly vvi ppo mtr bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 3 2 3 3 2 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg00500 [list] [network] Starch and sucrose metabolism (193 genes)
hvg00520 [list] [network] Amino sugar and nucleotide sugar metabolism (133 genes)
hvg01250 [list] [network] Biosynthesis of nucleotide sugars (91 genes)
GO BP
GO:0005978 [list] [network] glycogen biosynthetic process  (7 genes)  IEA  
GO CC
GO MF
GO:0008878 [list] [network] glucose-1-phosphate adenylyltransferase activity  (4 genes)  IEA  
Protein XP_044984294.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cysk 1,  chlo_mito 1  (predict for XP_044984294.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044984294.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123451814
osa-u.5
for
4334020
osa-u.5
for
4326594
osa-u.5
for
4339718
zma-u.5
for
542737
zma-u.5
for
542072
ath-u.5
for
APL3
ath-u.5
for
APL4
ath-u.5
for
APL1
gma-u.5
for
100798736
gma-u.5
for
100808791
gma-u.5
for
100799431
sly-u.5
for
agpL3
sly-u.5
for
AgpL1
vvi-u.5
for
100253688
ppo-u.5
for
7456364
ppo-u.5
for
7470001
mtr-u.5
for
11417144
mtr-u.5
for
25490207
mtr-u.5
for
11418220


Ortholog ID: 367
Species hvu hvu tae tae bdi bdi osa osa zma zma sbi ath ath gma gma sly bra vvi ppo mtr mtr ghi ghi bna bna sot cit nta nta cre cre
Symbol LOC123407122 LOC123452988 LOC100037637 LOC543278 LOC100832788 LOC100837929 LOC4339718 LOC4346656 LOC542737 LOC542761 LOC8083808 APL1 APL4 LOC100798736 LOC100792088 AgpL1 LOC103839024 LOC100240927 LOC7456025 LOC11436552 LOC25490207 LOC107942434 LOC107912483 LOC106410767 LOC106446371 AGPS1 LOC102629211 LOC107762694 LOC107806492 CHLRE_13g567950v5 CHLRE_03g188250v5
Function* glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase large subunit glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic-like glucose-1-phosphate adenylyltransferase large subunit-like glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic/amyloplastic-like ADP-glucose pyrophosphorylase shrunken 2 glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic ADP glucose pyrophosphorylase large subunit 1 Glucose-1-phosphate adenylyltransferase family protein glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic ADP-glucose pyrophosphorylase large subunit glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic glucose-1-phosphate adenylyltransferase small subunit, chloroplastic glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic glucose-1-phosphate adenylyltransferase large subunit 1-like glucose-1-phosphate adenylyltransferase large subunit 1-like glucose-1-phosphate adenylyltransferase large subunit 1 glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00230 Purine metabolism 2
hvu03010 Ribosome 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 13
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00500 Starch and sucrose metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 9
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 11
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 9
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 7
zma00500 Starch and sucrose metabolism 6
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 12
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 7
ath00710 Carbon fixation by Calvin cycle 5
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 8
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00500 Starch and sucrose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 8
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly01240 Biosynthesis of cofactors 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra04145 Phagosome 4
bra04148 Efferocytosis 4
bra00500 Starch and sucrose metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 5
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr00860 Porphyrin metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 12
ghi00520 Amino sugar and nucleotide sugar metabolism 4
ghi01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 7
ghi00520 Amino sugar and nucleotide sugar metabolism 6
ghi01250 Biosynthesis of nucleotide sugars 6
ghi00061 Fatty acid biosynthesis 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 6
bna00500 Starch and sucrose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 9
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 8
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00460 Cyanoamino acid metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 8
cre00710 Carbon fixation by Calvin cycle 7
cre00500 Starch and sucrose metabolism 6
cre00030 Pentose phosphate pathway 5
cre00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 7
cre01200 Carbon metabolism 6
cre00710 Carbon fixation by Calvin cycle 5
cre00030 Pentose phosphate pathway 5
cre00520 Amino sugar and nucleotide sugar metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123407122 123452988 100037637 543278 100832788 100837929 4339718 4346656 542737 542761 8083808 832042 816697 100798736 100792088 544283 103839024 100240927 7456025 11436552 25490207 107942434 107912483 106410767 106446371 102591766 102629211 107762694 107806492 5719082 5717482
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