ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
hvu-r.1	123452386	uncharacterized LOC123452386
hvu-r.1	123452767	uncharacterized LOC123452767
tae-r.2	123113431	uncharacterized LOC123113431
tae-r.2	123105139	uncharacterized LOC123105139
tae-r.2	123122944	uncharacterized LOC123122944
bdi-r.1	100837825	uncharacterized LOC100837825
bdi-r.1	100827722	uncharacterized LOC100827722
osa-u.5	4352675	uncharacterized LOC4352675
osa-u.5	4334224	uncharacterized LOC4334224
zma-u.5	103644065	Pyridoxal phosphate (PLP)-dependent transferase superfamily protein
zma-u.5	100501764	uncharacterized LOC100501764
zma-u.5	100383242	Pyridoxal phosphate (PLP)-dependent transferase superfamily protein
sbi-r.1	8076617	uncharacterized LOC8076617
sbi-r.1	8086188	uncharacterized LOC8086188
ath-u.5	AT2G23520	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
ath-u.5	AT4G37100	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
ath-u.5	AT5G66950	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
gma-u.5	100794694	uncharacterized LOC100794694
gma-u.5	100793647	uncharacterized LOC100793647
gma-u.5	100783076	uncharacterized LOC100783076
sly-u.5	101256238	uncharacterized LOC101256238
bra-r.6	103863824	uncharacterized LOC103863824
bra-r.6	103864472	uncharacterized LOC103864472
bra-r.6	103837726	uncharacterized LOC103837726
vvi-u.5	100259174	uncharacterized LOC100259174
vvi-u.5	100852514	uncharacterized LOC100852514
ppo-u.5	7484108	uncharacterized LOC7484108
ppo-u.5	7492145	uncharacterized LOC7492145
mtr-u.5	25501667	uncharacterized LOC25501667
mtr-u.5	25501669	uncharacterized LOC25501669
ghi-r.1	121215285	uncharacterized LOC121215285
ghi-r.1	107935594	uncharacterized LOC107935594
ghi-r.1	107913129	uncharacterized LOC107913129
bna-r.1	106437828	uncharacterized LOC106437828
bna-r.1	125586343	uncharacterized LOC125586343
bna-r.1	111209900	uncharacterized LOC111209900
sot-r.1	102600396	uncharacterized LOC102600396
cit-r.1	102615948	uncharacterized LOC102615948
nta-r.1	107831657	uncharacterized LOC107831657
nta-r.1	107793930	uncharacterized LOC107793930

Top 50 coexpressed genes to 123452386 (hvu-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123452386 (hvu-r.1 coexpression data)

CoexMap"123452386"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_044984969.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 3, cyto_nucl 3

(predict for XP_044984969.1)

Subcellular
localization
TargetP

mito 5, chlo 5

(predict for XP_044984969.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123452386	hvu-r.1 for 123452767	tae-r.2 for 123113431	tae-r.2 for 123105139	tae-r.2 for 123122944	bdi-r.1 for 100837825	bdi-r.1 for 100827722	osa-u.5 for 4352675	osa-u.5 for 4334224	zma-u.5 for 103644065	zma-u.5 for 100501764	zma-u.5 for 100383242	sbi-r.1 for 8076617	sbi-r.1 for 8086188	ath-u.5 for AT2G23520	ath-u.5 for AT4G37100	ath-u.5 for AT5G66950	gma-u.5 for 100794694	gma-u.5 for 100793647	gma-u.5 for 100783076	sly-u.5 for 101256238	bra-r.6 for 103863824	bra-r.6 for 103864472	bra-r.6 for 103837726	vvi-u.5 for 100259174	vvi-u.5 for 100852514	ppo-u.5 for 7484108	ppo-u.5 for 7492145	mtr-u.5 for 25501667	mtr-u.5 for 25501669	ghi-r.1 for 121215285	ghi-r.1 for 107935594	ghi-r.1 for 107913129	bna-r.1 for 106437828	bna-r.1 for 125586343	bna-r.1 for 111209900	sot-r.1 for 102600396	cit-r.1 for 102615948	nta-r.1 for 107831657	nta-r.1 for 107793930

Ortholog

Ortholog ID: 3552

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123452386

uncharacterized LOC123452767

uncharacterized LOC123105139

uncharacterized LOC123122944

uncharacterized LOC123119562

uncharacterized LOC100837825

uncharacterized LOC100827722

uncharacterized LOC4352675

uncharacterized LOC4334224

Pyridoxal phosphate (PLP)-dependent transferase superfamily protein

uncharacterized LOC100501764

Pyridoxal phosphate (PLP)-dependent transferase superfamily protein

uncharacterized LOC8076617

uncharacterized LOC8086188

Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

uncharacterized LOC100794694

uncharacterized LOC100793647

uncharacterized LOC100777185

uncharacterized LOC101256238

uncharacterized LOC103863824

uncharacterized LOC103864472

uncharacterized LOC103837726

uncharacterized LOC100259174

uncharacterized LOC100852514

uncharacterized LOC7484108

uncharacterized LOC7492145

uncharacterized LOC25501667

uncharacterized LOC25501669

uncharacterized LOC121215285

uncharacterized LOC107935594

uncharacterized LOC107913129

uncharacterized LOC106366298

uncharacterized BNAC07G16420D

uncharacterized LOC106446472

uncharacterized LOC102600396

uncharacterized LOC102615948

uncharacterized LOC107831657

uncharacterized LOC107793930

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	4
bra04075	Plant hormone signal transduction	2
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	5
cit03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03030	DNA replication	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta03030	DNA replication	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

123452386

123452767

123105139

123122944

123119562

100837825

100827722

4352675

4334224

103644065

100501764

100383242

8076617

8086188

816884

829864

836829

100794694

100793647

100777185

101256238

103863824

103864472

103837726

100259174

100852514

7484108

7492145

25501667

25501669

121215285

107935594

107913129

106366298

106390352

106446472

102600396

102615948

107831657

107793930

The preparation time of this page was 0.1 [sec].


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	2	3	2	3	3	1	3	2	2	2	3	3	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123452386 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123452386 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**