ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	125575395	uncharacterized LOC125575395
bna-r.1	BNAC03G52330D	uncharacterized BNAC03G52330D
bna-r.1	106418664	uncharacterized LOC106418664
bna-r.1	106347401	uncharacterized LOC106347401
bra-r.6	103873038	uncharacterized LOC103873038
bra-r.6	103873476	uncharacterized LOC103873476
bra-r.6	103829980	uncharacterized LOC103829980
ath-u.5	AT3G49645	FAD-binding protein
ghi-r.1	107911138	uncharacterized LOC107911138
ghi-r.1	107897590	uncharacterized LOC107897590
cit-r.1	102629713	uncharacterized LOC102629713
gma-u.5	100801714	uncharacterized LOC100801714
gma-u.5	100776078	uncharacterized LOC100776078
vvi-u.5	100254847	uncharacterized LOC100254847
ppo-u.5	7467881	uncharacterized LOC7467881
mtr-u.5	25501395	uncharacterized LOC25501395
sly-u.5	101251121	uncharacterized LOC101251121
sot-r.1	102585043	uncharacterized LOC102585043
nta-r.1	107791357	uncharacterized LOC107791357
nta-r.1	107791154	uncharacterized LOC107791154
osa-u.5	4342882	uncharacterized LOC4342882
zma-u.5	100273411	uncharacterized LOC100273411
zma-u.5	100280986	uncharacterized LOC100280986
tae-r.2	123188636	uncharacterized LOC123188636
tae-r.2	123188635	uncharacterized LOC123188635
hvu-r.1	123444672	uncharacterized LOC123444672
sbi-r.1	8080168	uncharacterized LOC8080168
bdi-r.1	100837520	uncharacterized LOC100837520
bdi-r.1	100834736	uncharacterized LOC100834736

Annotation

functional annotation

KEGG

GO BP

GO:0008033 [list] [network] tRNA processing

(280 genes)

IEA

GO CC

GO MF

GO:0017150 [list] [network] tRNA dihydrouridine synthase activity	(14 genes)	IEA
GO:0050660 [list] [network] flavin adenine dinucleotide binding	(431 genes)	IEA

Protein

XP_048638540.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1

(predict for XP_048638540.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for XP_048638540.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125575395	bna-r.1 for BNAC03G52330D	bna-r.1 for 106418664	bna-r.1 for 106347401	bra-r.6 for 103873038	bra-r.6 for 103873476	bra-r.6 for 103829980	ath-u.5 for AT3G49645	ghi-r.1 for 107911138	ghi-r.1 for 107897590	cit-r.1 for 102629713	gma-u.5 for 100801714	gma-u.5 for 100776078	vvi-u.5 for 100254847	ppo-u.5 for 7467881	mtr-u.5 for 25501395	sly-u.5 for 101251121	sot-r.1 for 102585043	nta-r.1 for 107791357	nta-r.1 for 107791154	osa-u.5 for 4342882	zma-u.5 for 100273411	zma-u.5 for 100280986	tae-r.2 for 123188636	tae-r.2 for 123188635	hvu-r.1 for 123444672	sbi-r.1 for 8080168	bdi-r.1 for 100837520	bdi-r.1 for 100834736

Ortholog

Ortholog ID: 5645

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized BNAC03G52330D

uncharacterized LOC106347401

uncharacterized LOC106347777

uncharacterized LOC103873038

uncharacterized LOC103873476

uncharacterized LOC103829980

FAD-binding protein

uncharacterized LOC107911138

uncharacterized LOC107897590

uncharacterized LOC102629713

uncharacterized LOC100801714

uncharacterized LOC100776078

uncharacterized LOC100254847

uncharacterized LOC7467881

uncharacterized LOC25501395

uncharacterized LOC101251121

uncharacterized LOC102585043

uncharacterized LOC107791357

uncharacterized LOC107791154

uncharacterized LOC4342882

uncharacterized LOC100273411

uncharacterized LOC100280986

uncharacterized LOC123188636

uncharacterized LOC123188635

uncharacterized LOC123062380

uncharacterized LOC123444672

uncharacterized LOC8080168

uncharacterized LOC100837520

uncharacterized LOC100834736

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00540	Lipopolysaccharide biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath03022	Basal transcription factors	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	6
tae03420	Nucleotide excision repair	6
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	6
tae03030	DNA replication	4
tae03430	Mismatch repair	4
tae03020	RNA polymerase	3
tae03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3
tae04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

106421848

106347401

106347777

103873038

103873476

103829980

6241114

107911138

107897590

102629713

100801714

100776078

100254847

7467881

25501395

101251121

102585043

107791357

107791154

4342882

100273411

100280986

123188636

123188635

123062380

123444672

8080168

100837520

100834736

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 125575395 (bna-r.1 coexpression data)

Top 50 enrichment test to 125575395 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	1	2	1	2	1	1	1	1	1	2	1	2	2	1	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125575395 (bna-r.1 coexpression data)

Top 50 enrichment test to 125575395 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**