ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	125577870	galactinol synthase 2-like
bna-r.1	106391407	galactinol synthase 2
bna-r.1	106392335	galactinol synthase 1-like
bna-r.1	106396142	galactinol synthase 1
bra-r.6	103866399	galactinol synthase 1
bra-r.6	103843850	galactinol synthase 1
bra-r.6	103838671	galactinol synthase 2
ath-u.5	GolS4	galactinol synthase 4
ath-u.5	GolS1	galactinol synthase 1
ath-u.5	GolS3	galactinol synthase 3
ghi-r.1	107893739	galactinol synthase 2
ghi-r.1	107893753	galactinol synthase 2
ghi-r.1	107912304	galactinol synthase 1
cit-r.1	102616851	galactinol synthase 1
cit-r.1	102619819	galactinol synthase 1
cit-r.1	102628674	galactinol synthase 2-like
gma-u.5	100819991	galactinol synthase 1
gma-u.5	100809287	galactinol synthase 1
gma-u.5	100804007	galactinol synthase 2
vvi-u.5	100255485	galactinol synthase 1
vvi-u.5	100257918	galactinol synthase 2
vvi-u.5	100260126	galactinol synthase 2
ppo-u.5	7473221	galactinol synthase 1
ppo-u.5	7471087	galactinol synthase 1
ppo-u.5	7468122	galactinol synthase 1
mtr-u.5	25499633	galactinol synthase 2
mtr-u.5	11416930	galactinol synthase 2
mtr-u.5	11416931	galactinol synthase 2
sly-u.5	GolS2	galactinol synthase
sly-u.5	101244339	galactinol synthase 2-like
sly-u.5	101261450	galactinol synthase 1
sot-r.1	102589277	galactinol synthase 2
sot-r.1	102591561	galactinol synthase 1
sot-r.1	102592897	galactinol synthase 2-like
nta-r.1	107794006	galactinol synthase 1-like
nta-r.1	107783847	galactinol synthase 2
nta-r.1	107821202	galactinol synthase 2
osa-u.5	4332654	galactinol synthase 1
osa-u.5	4344351	galactinol synthase 2
zma-u.5	606403	galactinol synthase 1
zma-u.5	606405	galactinol synthase 2
tae-r.2	123043587	galactinol synthase 2
tae-r.2	123040542	galactinol synthase 2
hvu-r.1	123429407	galactinol synthase 2-like
hvu-r.1	123424659	galactinol synthase 2-like
hvu-r.1	123446536	galactinol synthase 2-like
sbi-r.1	8081053	galactinol synthase 2
sbi-r.1	8084956	galactinol synthase 2
bdi-r.1	100823302	galactinol synthase 1
bdi-r.1	100846042	galactinol synthase 2

Top 50 coexpressed genes to 125577870 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 125577870 (bna-r.1 coexpression data)

CoexMap"125577870"

[Cytoscape]

Annotation

functional annotation

KEGG

bna00052 [list] [network] Galactose metabolism (155 genes)

GO BP

GO CC

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(1486 genes)

IEA

Protein

XP_048595886.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 4, pero 1, cysk 1

(predict for XP_048595886.1)

Subcellular
localization
TargetP

other 9

(predict for XP_048595886.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125577870	bna-r.1 for 106391407	bna-r.1 for 106392335	bna-r.1 for 106396142	bra-r.6 for 103866399	bra-r.6 for 103843850	bra-r.6 for 103838671	ath-u.5 for GolS4	ath-u.5 for GolS1	ath-u.5 for GolS3	ghi-r.1 for 107893739	ghi-r.1 for 107893753	ghi-r.1 for 107912304	cit-r.1 for 102616851	cit-r.1 for 102619819	cit-r.1 for 102628674	gma-u.5 for 100819991	gma-u.5 for 100809287	gma-u.5 for 100804007	vvi-u.5 for 100255485	vvi-u.5 for 100257918	vvi-u.5 for 100260126	ppo-u.5 for 7473221	ppo-u.5 for 7471087	ppo-u.5 for 7468122	mtr-u.5 for 25499633	mtr-u.5 for 11416930	mtr-u.5 for 11416931	sly-u.5 for GolS2	sly-u.5 for 101244339	sly-u.5 for 101261450	sot-r.1 for 102589277	sot-r.1 for 102591561	sot-r.1 for 102592897	nta-r.1 for 107794006	nta-r.1 for 107783847	nta-r.1 for 107821202	osa-u.5 for 4332654	osa-u.5 for 4344351	zma-u.5 for 606403	zma-u.5 for 606405	tae-r.2 for 123043587	tae-r.2 for 123040542	hvu-r.1 for 123429407	hvu-r.1 for 123424659	hvu-r.1 for 123446536	sbi-r.1 for 8081053	sbi-r.1 for 8084956	bdi-r.1 for 100823302	bdi-r.1 for 100846042

Ortholog

Ortholog ID: 933

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GolS4

GolS3

GolS2

GolS2

Function^*

galactinol synthase 1-like

galactinol synthase 1

galactinol synthase 3

galactinol synthase 1

galactinol synthase 4

galactinol synthase 3

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase

galactinol synthase 2-like

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2-like

galactinol synthase 1-like

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

galactinol synthase 2-like

galactinol synthase 2

galactinol synthase 1

galactinol synthase 2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04712	Circadian rhythm - plant	3
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	8
bra03040	Spliceosome	3
bra00052	Galactose metabolism	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4
ath00460	Cyanoamino acid metabolism	3
ath00500	Starch and sucrose metabolism	3
ath00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	5
ath04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00350	Tyrosine metabolism	2
ghi00950	Isoquinoline alkaloid biosynthesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	3
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	6
gma00052	Galactose metabolism	2
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00052	Galactose metabolism	6
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi00906	Carotenoid biosynthesis	4
vvi04075	Plant hormone signal transduction	3
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00052	Galactose metabolism	3
vvi00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	5
ppo00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00910	Nitrogen metabolism	2
ppo01310	Nitrogen cycle	2
ppo00500	Starch and sucrose metabolism	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5
mtr00941	Flavonoid biosynthesis	3
mtr00944	Flavone and flavonol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	14
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly00052	Galactose metabolism	4
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	3
sly00940	Phenylpropanoid biosynthesis	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00052	Galactose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	8
nta00052	Galactose metabolism	3
nta03040	Spliceosome	2
nta04144	Endocytosis	2
nta00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6
nta04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00052	Galactose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	4
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa00052	Galactose metabolism	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	8
sbi00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00052	Galactose metabolism	4
sbi01200	Carbon metabolism	2
sbi00402	Benzoxazinoid biosynthesis	2
sbi00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106392335

106436392

106377002

103866399

103843850

103838508

842342

837457

842114

107931433

107933752

107893295

102616851

102628674

100819991

100809287

100792129

100257918

100260126

100261424

7473221

7465228

7492393

11416930

11416931

11433093

100316891

101244339

101261450

102589277

102591561

102592897

107794006

107814672

107763259

4332654

4344351

606403

606405

123043587

123184669

123429407

123424659

123446536

8081053

8084956

100823302

100846042

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	3	3	3	3	3	3	3	2	2	2	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125577870 (bna-r.1 coexpression data)

Top 50 enrichment test to 125577870 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**