ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	125580713	endo-1,3;1,4-beta-D-glucanase-like
bna-r.1	106376885	endo-1,3;1,4-beta-D-glucanase
bna-r.1	106353012	endo-1,3;1,4-beta-D-glucanase
bra-r.6	103828730	endo-1,3;1,4-beta-D-glucanase
bra-r.6	103832385	endo-1,3;1,4-beta-D-glucanase
bra-r.6	103828724	endo-1,3;1,4-beta-D-glucanase
ath-u.5	AT3G23570	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT3G23600	alpha/beta-Hydrolases superfamily protein
ghi-r.1	107927806	endo-1,3;1,4-beta-D-glucanase
ghi-r.1	107927792	endo-1,3;1,4-beta-D-glucanase
ghi-r.1	107916174	endo-1,3;1,4-beta-D-glucanase
cit-r.1	102623685	endo-1,3;1,4-beta-D-glucanase-like
cit-r.1	127900445	endo-1,3;1,4-beta-D-glucanase-like
cit-r.1	102612413	endo-1,3;1,4-beta-D-glucanase-like
gma-u.5	100813473	endo-1,3;1,4-beta-D-glucanase
gma-u.5	100803221	endo-1,3;1,4-beta-D-glucanase
gma-u.5	100802118	endo-1,3-1,4-beta-D-glucanase
vvi-u.5	100263020	endo-1,3;1,4-beta-D-glucanase
vvi-u.5	100257884	endo-1,3;1,4-beta-D-glucanase
vvi-u.5	100252738	endo-1,3;1,4-beta-D-glucanase
ppo-u.5	7481625	endo-1,3;1,4-beta-D-glucanase
ppo-u.5	7485048	endo-1,3;1,4-beta-D-glucanase
mtr-u.5	11446877	endo-1,3;1,4-beta-D-glucanase
mtr-u.5	25494013	endo-1,3;1,4-beta-D-glucanase
mtr-u.5	25494015	endo-1,3;1,4-beta-D-glucanase
sly-u.5	101244119	endo-1,3;1,4-beta-D-glucanase
sly-u.5	101248912	endo-1,3;1,4-beta-D-glucanase
sly-u.5	101261451	endo-1,3;1,4-beta-D-glucanase-like
sot-r.1	102602095	endo-1,3;1,4-beta-D-glucanase-like
sot-r.1	102599737	endo-1,3;1,4-beta-D-glucanase-like
sot-r.1	102590056	endo-1,3;1,4-beta-D-glucanase-like
nta-r.1	107762848	endo-1,3;1,4-beta-D-glucanase-like
nta-r.1	107765277	endo-1,3;1,4-beta-D-glucanase-like
nta-r.1	107768049	endo-1,3;1,4-beta-D-glucanase-like
osa-u.5	107275974	endo-1,3;1,4-beta-D-glucanase
osa-u.5	4338716	endo-1,3;1,4-beta-D-glucanase
osa-u.5	4338717	endo-1,3;1,4-beta-D-glucanase
zma-u.5	100282281	uncharacterized LOC100282281
zma-u.5	100282382	uncharacterized LOC100282382
zma-u.5	103653383	endo-1,3(4)-beta-D-glucanase
tae-r.2	123131988	endo-1,3;1,4-beta-D-glucanase
hvu-r.1	123441894	endo-1,3;1,4-beta-D-glucanase-like
hvu-r.1	123441884	endo-1,3;1,4-beta-D-glucanase-like
sbi-r.1	8075278	endo-1,3;1,4-beta-D-glucanase
bdi-r.1	100845689	endo-1,3;1,4-beta-D-glucanase
bdi-r.1	100845080	endo-1,3;1,4-beta-D-glucanase
bdi-r.1	100820927	endo-1,3;1,4-beta-D-glucanase
cre-r.1	CHLRE_16g679051v5	uncharacterized protein
cre-r.1	CHLRE_16g679750v5	uncharacterized protein
cre-r.1	CHLRE_16g679800v5	uncharacterized protein

Top 50 coexpressed genes to 125580713 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 125580713 (bna-r.1 coexpression data)

CoexMap"125580713"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016787 [list] [network] hydrolase activity

(9405 genes)

IEA

Protein

XP_048601667.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, extr 1

(predict for XP_048601667.1)

Subcellular
localization
TargetP

other 7

(predict for XP_048601667.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 125580713	bna-r.1 for 106376885	bna-r.1 for 106353012	bra-r.6 for 103828730	bra-r.6 for 103832385	bra-r.6 for 103828724	ath-u.5 for AT3G23570	ath-u.5 for AT3G23600	ghi-r.1 for 107927806	ghi-r.1 for 107927792	ghi-r.1 for 107916174	cit-r.1 for 102623685	cit-r.1 for 127900445	cit-r.1 for 102612413	gma-u.5 for 100813473	gma-u.5 for 100803221	gma-u.5 for 100802118	vvi-u.5 for 100263020	vvi-u.5 for 100257884	vvi-u.5 for 100252738	ppo-u.5 for 7481625	ppo-u.5 for 7485048	mtr-u.5 for 11446877	mtr-u.5 for 25494013	mtr-u.5 for 25494015	sly-u.5 for 101244119	sly-u.5 for 101248912	sly-u.5 for 101261451	sot-r.1 for 102602095	sot-r.1 for 102599737	sot-r.1 for 102590056	nta-r.1 for 107762848	nta-r.1 for 107765277	nta-r.1 for 107768049	osa-u.5 for 107275974	osa-u.5 for 4338716	osa-u.5 for 4338717	zma-u.5 for 100282281	zma-u.5 for 100282382	zma-u.5 for 103653383	tae-r.2 for 123131988	hvu-r.1 for 123441894	hvu-r.1 for 123441884	sbi-r.1 for 8075278	bdi-r.1 for 100845689	bdi-r.1 for 100845080	bdi-r.1 for 100820927	cre-r.1 for CHLRE_16g679051v5	cre-r.1 for CHLRE_16g679750v5	cre-r.1 for CHLRE_16g679800v5

Ortholog

Ortholog ID: 571

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

endo-1,3;1,4-beta-D-glucanase

endo-1,3;1,4-beta-D-glucanase-like

endo-1,3;1,4-beta-D-glucanase

alpha/beta-Hydrolases superfamily protein

endo-1,3;1,4-beta-D-glucanase

endo-1,3;1,4-beta-D-glucanase-like

endo-1,3-1,4-beta-D-glucanase

endo-1,3;1,4-beta-D-glucanase

endo-1,3;1,4-beta-D-glucanase-like

uncharacterized AIM2 family protein C30D10.14-like

endo-1,3;1,4-beta-D-glucanase-like

hydrolase pyvD-like

endo-1,3;1,4-beta-D-glucanase

uncharacterized LOC100282382

endo-1,3(4)-beta-D-glucanase

endo-1,3(4)-beta-D-glucanase-like

endo-1,3;1,4-beta-D-glucanase

endo-1,3;1,4-beta-D-glucanase-like

endo-1,3;1,4-beta-D-glucanase

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	4
bna04142	Lysosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00480	Glutathione metabolism	5
bna00230	Purine metabolism	2
bna00240	Pyrimidine metabolism	2
bna01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bra01230	Biosynthesis of amino acids	3
bra00480	Glutathione metabolism	3
bra00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00920	Sulfur metabolism	5
ath00966	Glucosinolate biosynthesis	5
ath00380	Tryptophan metabolism	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath00230	Purine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00620	Pyruvate metabolism	4
ghi00480	Glutathione metabolism	4
ghi00260	Glycine, serine and threonine metabolism	2
ghi00670	One carbon pool by folate	2
ghi00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	8
ghi00710	Carbon fixation by Calvin cycle	6
ghi00010	Glycolysis / Gluconeogenesis	5
ghi00020	Citrate cycle (TCA cycle)	5
ghi00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	5
gma00941	Flavonoid biosynthesis	3
gma00010	Glycolysis / Gluconeogenesis	3
gma00040	Pentose and glucuronate interconversions	3
gma00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	3
gma04142	Lysosome	2
gma00460	Cyanoamino acid metabolism	2
gma00500	Starch and sucrose metabolism	2
gma00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	2
vvi00280	Valine, leucine and isoleucine degradation	2
vvi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	3
ppo01240	Biosynthesis of cofactors	2
ppo01230	Biosynthesis of amino acids	2
ppo03083	Polycomb repressive complex	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00053	Ascorbate and aldarate metabolism	3
mtr00010	Glycolysis / Gluconeogenesis	2
mtr00561	Glycerolipid metabolism	2
mtr00620	Pyruvate metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2
mtr00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00480	Glutathione metabolism	6
sly00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00592	alpha-Linolenic acid metabolism	2
nta00480	Glutathione metabolism	2
nta00730	Thiamine metabolism	2
nta00740	Riboflavin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00270	Cysteine and methionine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	4
osa00920	Sulfur metabolism	3
osa00260	Glycine, serine and threonine metabolism	2
osa00270	Cysteine and methionine metabolism	2
osa00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00053	Ascorbate and aldarate metabolism	2
zma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	2
tae00240	Pyrimidine metabolism	2
tae01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	4
tae00280	Valine, leucine and isoleucine degradation	3
tae00410	beta-Alanine metabolism	3
tae00640	Propanoate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	2
hvu00710	Carbon fixation by Calvin cycle	2
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	5
hvu01200	Carbon metabolism	4
hvu00030	Pentose phosphate pathway	2
hvu00051	Fructose and mannose metabolism	2
hvu00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00600	Sphingolipid metabolism	2
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00906	Carotenoid biosynthesis	2
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00010	Glycolysis / Gluconeogenesis	2
cre00620	Pyruvate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106353012

106357868

106357874

103828730

103832385

103828724

821936

821939

107896692

107943552

107943554

127900445

107178406

100802118

100801591

100263020

100257884

100252738

7481625

7485048

11446877

25494013

25494017

101248912

101261451

101266984

102599737

102584104

102601759

107762848

107765277

107818041

4338716

4338717

100282382

103653383

103653384

123066159

123149588

123441853

123440678

123407309

8075278

100845080

100821523

100822628

5721530

5721543

5721544

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	3	3	3	3	2	3	3	3	3	3	3	1	2	1	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 125580713 (bna-r.1 coexpression data)

Top 50 enrichment test to 125580713 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**