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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TFL2   uncharacterized protein 
 gma-u.5   100807755   chromo domain protein LHP1-like 
 gma-u.5   LHP1-2   chromo domain-containing protein LHP1-2 
 vvi-u.5   100250685   chromo domain-containing protein LHP1 
 ppo-u.5   7459206   chromo domain-containing protein LHP1 
 ppo-u.5   7493863   chromo domain-containing protein LHP1 
 mtr-u.5   112420461   chromo domain-containing protein LHP1 
 mtr-u.5   112417529   chromo domain-containing protein LHP1 
 sly-u.5   LHP1   chromo domain protein LHP1 
 osa-u.5   9268323   probable chromo domain-containing protein LHP1 
 zma-u.5   541970   chromdomain-containing protein CRD101 

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Top 50 coexpressed genes to TFL2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TFL2 (ath-u.5 coexpression data)

CoexMap"125584125"


bnaLOC125584125 | Entrez gene ID : 125584125    
Species ath gma vvi ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031507 [list] [network] heterochromatin formation  (73 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_048607980.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048607980.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048607980.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
TFL2
gma-u.5
for
100807755
gma-u.5
for
LHP1-2
vvi-u.5
for
100250685
ppo-u.5
for
7459206
ppo-u.5
for
7493863
mtr-u.5
for
112420461
mtr-u.5
for
112417529
sly-u.5
for
LHP1
osa-u.5
for
9268323
zma-u.5
for
541970


Ortholog ID: 4611
Species bna bna bra bra ath ghi ghi cit gma vvi ppo ppo mtr mtr sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106387742 LOC106426184 LOC103833195 LOC103851120 TFL2 LOC107962677 LOC121223292 LOC102624337 LHP1-1 LOC100250685 LOC7459206 LOC7493863 LOC112420461 LOC112417529 LHP1 LOC102593818 LOC102585992 LOC107807769 LOC107765019 LOC9268323 LOC541970 LOC123165199 LOC123147798 LOC123407960 LOC8155636 LOC100833413
Function* chromo domain-containing protein LHP1 chromo domain-containing protein LHP1-like chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 uncharacterized protein chromo domain-containing protein LHP1 chromo domain protein LHP1-like chromo domain-containing protein LHP1 chromo domain-containing protein LHP1-1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain-containing protein LHP1 chromo domain protein LHP1 chromo domain protein LHP1-like chromo domain protein LHP1 chromo domain protein LHP1-like chromo domain protein LHP1 probable chromo domain-containing protein LHP1 chromdomain-containing protein CRD101 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1 probable chromo domain-containing protein LHP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 5
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387742 106426184 103833195 103851120 831635 107962677 121223292 102624337 100782342 100250685 7459206 7493863 112420461 112417529 544233 102593818 102585992 107807769 107765019 9268323 541970 123165199 123147798 123407960 8155636 100833413
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