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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125590106   26S proteasome regulatory subunit 6A homolog 
 ath-u.5   RPT5A   regulatory particle triple-A ATPase 5A 
 ath-u.5   RPT5B   26S proteasome AAA-ATPase subunit RPT5B 
 gma-u.5   100788486   26S proteasome regulatory subunit 6A homolog 
 gma-u.5   100798637   26S protease regulatory subunit 6A homolog A-like 
 gma-u.5   100807867   26S proteasome regulatory subunit 6A homolog 
 vvi-u.5   100259757   26S protease regulatory subunit 6A homolog A-like 
 vvi-u.5   100256329   26S proteasome regulatory subunit 6A homolog 
 ppo-u.5   18098667   26S proteasome regulatory subunit 6A homolog 
 ppo-u.5   7481730   26S proteasome regulatory subunit 6A homolog A 
 mtr-u.5   25491789   26S proteasome regulatory subunit 6A homolog 
 mtr-u.5   11446055   26S proteasome regulatory subunit 6A homolog 
 sly-u.5   LeMA-1   26S protease regulatory subunit 6A homolog 
 osa-u.5   4340276   26S proteasome regulatory subunit 6A homolog 
 osa-u.5   4331050   26S proteasome regulatory subunit 6A homolog 
 zma-u.5   103638008   26S proteasome regulatory subunit 6A homolog 
 zma-u.5   100274559   26S protease regulatory subunit 6A homolog A 
 zma-u.5   100273594   uncharacterized LOC100273594 

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Top 50 coexpressed genes to 125590106 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125590106 (bna-r.1 coexpression data)

CoexMap"125590106"


bnaLOC125590106 | Entrez gene ID : 125590106    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 3 2 2 2 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03050 [list] [network] Proteasome (219 genes)
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (494 genes)  IEA  
GO CC
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (65 genes)  IEA  
GO MF
GO:0036402 [list] [network] proteasome-activating activity  (46 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (1360 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_048619093.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_048619093.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048619093.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125590106

.
ath-u.5
for
RPT5A

.
ath-u.5
for
RPT5B

.
gma-u.5
for
100788486

.
gma-u.5
for
100798637

.
gma-u.5
for
100807867

.
vvi-u.5
for
100259757

.
vvi-u.5
for
100256329

.
ppo-u.5
for
18098667

.
ppo-u.5
for
7481730

.
mtr-u.5
for
25491789

.
mtr-u.5
for
11446055

.
sly-u.5
for
LeMA-1

.
osa-u.5
for
4340276

.
osa-u.5
for
4331050

.
zma-u.5
for
103638008

.
zma-u.5
for
100274559

.
zma-u.5
for
100273594

.


Ortholog ID: 3678
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi bdi nta nta
Symbol RPT5A RPT5B LOC100788486 LOC100798637 LeMA-1 LOC4331050 LOC4340276 LOC100274559 LOC100273594 LOC103870815 LOC103859097 LOC100256329 LOC100259757 LOC7481730 LOC18098667 LOC11446055 LOC25491789 LOC123080257 LOC542904 LOC123401345 LOC107961902 LOC107930935 LOC111214163 LOC125590106 CHLRE_10g439150v5 LOC8075532 LOC110434961 LOC102580368 LOC102614810 LOC102615113 LOC100839188 LOC100840734 LOC107782228 LOC107827589
Function* regulatory particle triple-A ATPase 5A 26S proteasome AAA-ATPase subunit RPT5B 26S proteasome regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog A-like 26S protease regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog A uncharacterized LOC100273594 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog A-like 26S proteasome regulatory subunit 6A homolog A 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog uncharacterized protein 26S protease regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog 26S protease regulatory subunit 6A homolog 26S proteasome regulatory subunit 6A homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 13
gma03018 RNA degradation 4
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 13
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 9
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 9
zma03420 Nucleotide excision repair 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra03015 mRNA surveillance pathway 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00190 Oxidative phosphorylation 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi00190 Oxidative phosphorylation 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 10
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 7
sbi01240 Biosynthesis of cofactors 3
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 11
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 9
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
nta00051 Fructose and mannose metabolism 2
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819718 837431 100788486 100798637 544089 4331050 4340276 100274559 100273594 103870815 103859097 100256329 100259757 7481730 18098667 11446055 25491789 123080257 542904 123401345 107961902 107930935 111214163 125590106 5716081 8075532 110434961 102580368 102614810 102615113 100839188 100840734 107782228 107827589
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