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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125592820   DNA damage-binding protein 1a-like 
 bna-r.1   106360998   DNA damage-binding protein 1b 
 bna-r.1   106389894   DNA damage-binding protein 1b 
 bna-r.1   106404588   DNA damage-binding protein 1a 
 bra-r.6   103839745   DNA damage-binding protein 1a 
 bra-r.6   103834207   DNA damage-binding protein 1b 
 ath-u.5   DDB1A   damaged DNA binding protein 1A 
 ath-u.5   DDB1B   damaged DNA binding protein 1B 
 ghi-r.1   107938502   DNA damage-binding protein 1a 
 cit-r.1   102623596   DNA damage-binding protein 1a 
 gma-u.5   100777459   DNA damage-binding protein 1 
 vvi-u.5   100256664   DNA damage-binding protein 1 
 ppo-u.5   7470811   DNA damage-binding protein 1a 
 mtr-u.5   11435521   DNA damage-binding protein 1 
 sly-u.5   DDB1   DNA damage-binding protein 1 
 sot-r.1   102579151   DNA damage-binding protein 1 
 nta-r.1   107797933   DNA damage-binding protein 1 
 nta-r.1   107767432   DNA damage-binding protein 1 
 osa-u.5   DBB1   DNA damage-binding protein 1-like 
 zma-u.5   103635427   uncharacterized LOC103635427 
 zma-u.5   100279448   uncharacterized LOC100279448 
 tae-r.2   123183372   DNA damage-binding protein 1 
 tae-r.2   123070718   DNA damage-binding protein 1 
 tae-r.2   123061365   DNA damage-binding protein 1 
 hvu-r.1   123452613   DNA damage-binding protein 1 
 hvu-r.1   123443785   DNA damage-binding protein 1-like 
 sbi-r.1   8066563   DNA damage-binding protein 1 
 bdi-r.1   100841631   DNA damage-binding protein 1 
 cre-r.1   CHLRE_10g432000v5   uncharacterized protein 

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Top 50 coexpressed genes to 125592820 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125592820 (bna-r.1 coexpression data)

CoexMap"125592820"


bnaLOC125592820 | Entrez gene ID : 125592820    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 1 1 1 1 1 1 1 2 1 2 3 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03420 [list] [network] Nucleotide excision repair (233 genes)
bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048624207.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cysk_nucl 1,  E.R. 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  E.R._plas 1  (predict for XP_048624207.1)
Subcellular
localization
TargetP
other 5  (predict for XP_048624207.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125592820
bna-r.1
for
106360998
bna-r.1
for
106389894
bna-r.1
for
106404588
bra-r.6
for
103839745
bra-r.6
for
103834207
ath-u.5
for
DDB1A
ath-u.5
for
DDB1B
ghi-r.1
for
107938502
cit-r.1
for
102623596
gma-u.5
for
100777459
vvi-u.5
for
100256664
ppo-u.5
for
7470811
mtr-u.5
for
11435521
sly-u.5
for
DDB1
sot-r.1
for
102579151
nta-r.1
for
107797933
nta-r.1
for
107767432
osa-u.5
for
DBB1
zma-u.5
for
103635427
zma-u.5
for
100279448
tae-r.2
for
123183372
tae-r.2
for
123070718
tae-r.2
for
123061365
hvu-r.1
for
123452613
hvu-r.1
for
123443785
sbi-r.1
for
8066563
bdi-r.1
for
100841631
cre-r.1
for
CHLRE_10g432000v5


Ortholog ID: 6917
Species bna bna bna bra bra ath ath ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol LOC106360998 LOC106389894 LOC106404588 LOC103839745 LOC103834207 DDB1A DDB1B LOC107938502 LOC102623596 LOC100777459 LOC100256664 LOC7470811 LOC11435521 DDB1 LOC102579151 LOC107797933 LOC107767432 DBB1 LOC103635427 LOC100279448 LOC123183372 LOC123061365 LOC123149625 LOC123452613 LOC123443785 LOC8066563 LOC100841631 CHLRE_10g432000v5
Function* DNA damage-binding protein 1b DNA damage-binding protein 1b DNA damage-binding protein 1a DNA damage-binding protein 1a DNA damage-binding protein 1b damaged DNA binding protein 1A damaged DNA binding protein 1B DNA damage-binding protein 1a DNA damage-binding protein 1a DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1a DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1-like uncharacterized LOC103635427 uncharacterized LOC100279448 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1 DNA damage-binding protein 1-like DNA damage-binding protein 1 DNA damage-binding protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna00970 Aminoacyl-tRNA biosynthesis 3
bna03420 Nucleotide excision repair 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03420 Nucleotide excision repair 7
bna03020 RNA polymerase 5
bna03040 Spliceosome 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03420 Nucleotide excision repair 2
ath04120 Ubiquitin mediated proteolysis 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
ghi03082 ATP-dependent chromatin remodeling 4
ghi00230 Purine metabolism 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03013 Nucleocytoplasmic transport 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03040 Spliceosome 2
sly03420 Nucleotide excision repair 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03050 Proteasome 3
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04120 Ubiquitin mediated proteolysis 3
zma03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03420 Nucleotide excision repair 2
bdi03013 Nucleocytoplasmic transport 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106360998 106389894 106404588 103839745 103834207 825890 827857 107938502 102623596 100777459 100256664 7470811 11435521 778355 102579151 107797933 107767432 4339794 103635427 100279448 123183372 123061365 123149625 123452613 123443785 8066563 100841631 5728060
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