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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125593008   ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial-like 
 bna-r.1   106372673   ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial 
 bna-r.1   106391644   ferredoxin-dependent glutamate synthase 2, chloroplastic 
 bna-r.1   106352787   ferredoxin-dependent glutamate synthase 2, chloroplastic 
 bra-r.6   103857972   ferredoxin-dependent glutamate synthase 2, chloroplastic-like 
 bra-r.6   103865867   ferredoxin-dependent glutamate synthase 2, chloroplastic 
 bra-r.6   103847326   ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial 
 ath-u.5   GLU2   glutamate synthase 2 
 ath-u.5   GLU1   glutamate synthase 1 
 ghi-r.1   107921512   ferredoxin-dependent glutamate synthase, chloroplastic 
 ghi-r.1   107921972   ferredoxin-dependent glutamate synthase, chloroplastic 
 cit-r.1   102609089   ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial 
 gma-u.5   548016   ferredoxin-dependent glutamate synthase, chloroplastic 
 gma-u.5   100809299   ferredoxin-dependent glutamate synthase, chloroplastic 
 vvi-u.5   100233082   ferredoxin-dependent glutamate synthase, chloroplastic 
 ppo-u.5   7495696   ferredoxin-dependent glutamate synthase, chloroplastic 
 ppo-u.5   7458925   ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial 
 mtr-u.5   11415038   ferredoxin-dependent glutamate synthase, chloroplastic 
 sly-u.5   101246028   ferredoxin-dependent glutamate synthase, chloroplastic 
 sot-r.1   102600112   ferredoxin-dependent glutamate synthase, chloroplastic 
 nta-r.1   107781744   ferredoxin-dependent glutamate synthase, chloroplastic 
 nta-r.1   107793691   ferredoxin-dependent glutamate synthase, chloroplastic-like 
 osa-u.5   4344164   ferredoxin-dependent glutamate synthase, chloroplastic-like 
 zma-u.5   542710   ferredoxin-dependent glutamate synthase 1 
 tae-r.2   123043871   ferredoxin-dependent glutamate synthase, chloroplastic 
 tae-r.2   123187649   ferredoxin-dependent glutamate synthase, chloroplastic 
 tae-r.2   123051744   ferredoxin-dependent glutamate synthase, chloroplastic 
 hvu-r.1   123424922   ferredoxin-dependent glutamate synthase, chloroplastic 
 sbi-r.1   8073135   ferredoxin-dependent glutamate synthase, chloroplastic 
 bdi-r.1   100827937   ferredoxin-dependent glutamate synthase, chloroplastic 
 cre-r.1   CHLRE_12g514050v5   uncharacterized protein 

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Top 50 coexpressed genes to 125593008 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125593008 (bna-r.1 coexpression data)

CoexMap"125593008"


bnaLOC125593008 | Entrez gene ID : 125593008    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00630 [list] [network] Glyoxylate and dicarboxylate metabolism (260 genes)
bna00910 [list] [network] Nitrogen metabolism (139 genes)
GO BP
GO:0019676 [list] [network] ammonia assimilation cycle  (5 genes)  IEA  
GO:0006537 [list] [network] glutamate biosynthetic process  (11 genes)  IEA  
GO CC
GO MF
GO:0016040 [list] [network] glutamate synthase (NADH) activity  (7 genes)  IEA  
Protein XP_048624810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_048624810.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_048624810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125593008
bna-r.1
for
106372673
bna-r.1
for
106391644
bna-r.1
for
106352787
bra-r.6
for
103857972
bra-r.6
for
103865867
bra-r.6
for
103847326
ath-u.5
for
GLU2
ath-u.5
for
GLU1
ghi-r.1
for
107921512
ghi-r.1
for
107921972
cit-r.1
for
102609089
gma-u.5
for
548016
gma-u.5
for
100809299
vvi-u.5
for
100233082
ppo-u.5
for
7495696
ppo-u.5
for
7458925
mtr-u.5
for
11415038
sly-u.5
for
101246028
sot-r.1
for
102600112
nta-r.1
for
107781744
nta-r.1
for
107793691
osa-u.5
for
4344164
zma-u.5
for
542710
tae-r.2
for
123043871
tae-r.2
for
123187649
tae-r.2
for
123051744
hvu-r.1
for
123424922
sbi-r.1
for
8073135
bdi-r.1
for
100827937
cre-r.1
for
CHLRE_12g514050v5


Ortholog ID: 6842
Species bna bna bna bra bra bra ath ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106372673 LOC106391644 LOC106431110 LOC103857972 LOC103865867 LOC103847326 GLU2 GLU1 LOC107921512 LOC107921972 LOC102609089 LOC548016 LOC100809299 LOC100233082 LOC7495696 LOC7458925 LOC11415038 LOC101246028 LOC102600112 LOC107781744 LOC107793691 LOC4344164 LOC542710 LOC123043871 LOC123187649 LOC123051744 LOC123424922 LOC8073135 LOC100827937 CHLRE_12g514050v5
Function* ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial ferredoxin-dependent glutamate synthase 2, chloroplastic ferredoxin-dependent glutamate synthase 2, chloroplastic ferredoxin-dependent glutamate synthase 2, chloroplastic-like ferredoxin-dependent glutamate synthase 2, chloroplastic ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial glutamate synthase 2 glutamate synthase 1 ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic-like ferredoxin-dependent glutamate synthase, chloroplastic-like ferredoxin-dependent glutamate synthase 1 ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic ferredoxin-dependent glutamate synthase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00630 Glyoxylate and dicarboxylate metabolism 11
bna01200 Carbon metabolism 9
bna00260 Glycine, serine and threonine metabolism 5
bna00460 Cyanoamino acid metabolism 5
bna00670 One carbon pool by folate 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00620 Pyruvate metabolism 3
bna00710 Carbon fixation by Calvin cycle 3
bna01200 Carbon metabolism 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00620 Pyruvate metabolism 3
bna00710 Carbon fixation by Calvin cycle 3
bna01200 Carbon metabolism 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00910 Nitrogen metabolism 3
bra01230 Biosynthesis of amino acids 2
bra04075 Plant hormone signal transduction 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00860 Porphyrin metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00910 Nitrogen metabolism 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00030 Pentose phosphate pathway 2
ath00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 8
ath00630 Glyoxylate and dicarboxylate metabolism 7
ath00710 Carbon fixation by Calvin cycle 5
ath00260 Glycine, serine and threonine metabolism 4
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 4
ghi00040 Pentose and glucuronate interconversions 2
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi01200 Carbon metabolism 4
ghi00380 Tryptophan metabolism 4
ghi00040 Pentose and glucuronate interconversions 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04136 Autophagy - other 3
gma04518 Integrin signaling 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00630 Glyoxylate and dicarboxylate metabolism 7
gma01200 Carbon metabolism 5
gma00260 Glycine, serine and threonine metabolism 4
gma00710 Carbon fixation by Calvin cycle 3
gma00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00900 Terpenoid backbone biosynthesis 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo00710 Carbon fixation by Calvin cycle 5
ppo01200 Carbon metabolism 5
ppo00630 Glyoxylate and dicarboxylate metabolism 4
ppo00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr00910 Nitrogen metabolism 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 12
nta01200 Carbon metabolism 11
nta00260 Glycine, serine and threonine metabolism 8
nta00710 Carbon fixation by Calvin cycle 7
nta00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 12
nta01200 Carbon metabolism 11
nta00260 Glycine, serine and threonine metabolism 8
nta00710 Carbon fixation by Calvin cycle 7
nta00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 10
osa00630 Glyoxylate and dicarboxylate metabolism 9
osa00710 Carbon fixation by Calvin cycle 5
osa01230 Biosynthesis of amino acids 5
osa00260 Glycine, serine and threonine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 3
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae00260 Glycine, serine and threonine metabolism 6
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 6
tae00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae00260 Glycine, serine and threonine metabolism 6
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 6
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae00910 Nitrogen metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00620 Pyruvate metabolism 4
hvu00710 Carbon fixation by Calvin cycle 4
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 3
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 9
bdi00630 Glyoxylate and dicarboxylate metabolism 8
bdi00710 Carbon fixation by Calvin cycle 4
bdi00260 Glycine, serine and threonine metabolism 3
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 5
cre01230 Biosynthesis of amino acids 4
cre00230 Purine metabolism 3
cre00250 Alanine, aspartate and glutamate metabolism 3
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106372673 106391644 106431110 103857972 103865867 103847326 818721 830292 107921512 107921972 102609089 548016 100809299 100233082 7495696 7458925 11415038 101246028 102600112 107781744 107793691 4344164 542710 123043871 123187649 123051744 123424922 8073135 100827937 5728540
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