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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125593370   F-box protein At5g07670-like 
 ath-u.5   AT5G07670   RNI-like superfamily protein 
 ath-u.5   AT5G51370   RNI-like superfamily protein 
 ath-u.5   AT5G51380   RNI-like superfamily protein 
 gma-u.5   100781577   F-box protein At5g07670 
 gma-u.5   100812650   F-box protein At5g07670 
 gma-u.5   100814158   F-box protein At5g07670 
 vvi-u.5   100247967   F-box protein At5g51380 
 vvi-u.5   100252021   F-box protein At5g07670 
 ppo-u.5   7465502   F-box protein At5g07670 
 ppo-u.5   7483820   F-box protein At5g51370 
 ppo-u.5   18094019   F-box protein At5g07670 
 mtr-u.5   25490352   F-box protein At5g07670 
 mtr-u.5   25491915   F-box protein At5g07670 
 sly-u.5   101265808   F-box protein At5g51370-like 
 sly-u.5   101247473   F-box protein At5g51380-like 
 osa-u.5   4330211   F-box protein At5g51370 
 zma-u.5   103627509   F-box protein At5g51370-like 

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Top 50 coexpressed genes to 125593370 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125593370 (bna-r.1 coexpression data)

CoexMap"125593370"


bnaLOC125593370 | Entrez gene ID : 125593370    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 3 3 2 3 2 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (170 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (134 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048625837.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_048625837.1)
Subcellular
localization
TargetP
other 5  (predict for XP_048625837.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125593370

.
ath-u.5
for
AT5G07670

.
ath-u.5
for
AT5G51370

.
ath-u.5
for
AT5G51380

.
gma-u.5
for
100781577

.
gma-u.5
for
100812650

.
gma-u.5
for
100814158

.
vvi-u.5
for
100247967

.
vvi-u.5
for
100252021

.
ppo-u.5
for
7465502

.
ppo-u.5
for
7483820

.
ppo-u.5
for
18094019

.
mtr-u.5
for
25490352

.
mtr-u.5
for
25491915

.
sly-u.5
for
101265808

.
sly-u.5
for
101247473

.
osa-u.5
for
4330211

.
zma-u.5
for
103627509

.


Ortholog ID: 3137
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G51370 AT5G51380 LOC100781577 LOC100814158 LOC101265808 LOC101247473 LOC4330211 LOC103627509 LOC103857184 LOC103844392 LOC100252021 LOC100247967 LOC7465502 LOC18105175 LOC25490352 LOC25491915 LOC123145036 LOC123127943 LOC123401662 LOC107933517 LOC107949676 LOC125593370 LOC106402587 CHLRE_08g358553v5 LOC8073954 LOC102579153 LOC102593520 LOC102612620 LOC100836165 LOC107785247 LOC107804988
Function* RNI-like superfamily protein RNI-like superfamily protein F-box protein At5g07670 F-box protein At5g07670 F-box protein At5g51370-like F-box protein At5g51380-like F-box protein At5g51370 F-box protein At5g51370-like F-box protein At5g51380 F-box protein At5g51380 F-box protein At5g07670 F-box protein At5g51380 F-box protein At5g07670 F-box protein At5g07670 F-box protein At5g07670 F-box protein At5g07670 F-box protein At5g51370 F-box protein At5g51370 F-box protein At5g51370-like F-box protein At5g07670 F-box protein At5g07670 F-box protein At5g07670-like F-box protein At5g51380-like uncharacterized protein F-box protein At5g51370 F-box protein At5g51380-like F-box protein At5g51370-like F-box protein At5g51380-like F-box protein At5g51370-like F-box protein At5g07670-like F-box protein At5g51380-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04814 Motor proteins 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 5
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo03030 DNA replication 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00905 Brassinosteroid biosynthesis 3
tae00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae00190 Oxidative phosphorylation 3
tae00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 4
ghi00480 Glutathione metabolism 3
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03410 Base excision repair 4
bna03420 Nucleotide excision repair 4
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 7
cre00020 Citrate cycle (TCA cycle) 5
cre00190 Oxidative phosphorylation 3
cre00620 Pyruvate metabolism 3
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00480 Glutathione metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835211 835212 100781577 100814158 101265808 101247473 4330211 103627509 103857184 103844392 100252021 100247967 7465502 18105175 25490352 25491915 123145036 123127943 123401662 107933517 107949676 125593370 106402587 66054274 8073954 102579153 102593520 102612620 100836165 107785247 107804988
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