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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125606334   transcription factor bHLH147-like 
 bna-r.1   125593858   transcription factor bHLH148-like 
 bna-r.1   125578332   transcription factor bHLH147-like 
 bna-r.1   106386675   transcription factor bHLH147-like 
 bra-r.6   103833556   transcription factor bHLH147 
 bra-r.6   103871653   transcription factor bHLH149 
 bra-r.6   103849832   transcription factor bHLH148 
 ath-u.5   AT3G06590   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT3G17100   sequence-specific DNA binding transcription factor 
 ath-u.5   AT1G09250   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ghi-r.1   107893302   transcription factor bHLH149 
 ghi-r.1   107893831   transcription factor bHLH149 
 ghi-r.1   107896604   transcription factor bHLH147 
 cit-r.1   102614299   transcription factor bHLH147 
 cit-r.1   102628119   transcription factor bHLH149 
 gma-u.5   100802046   transcription factor bHLH149 
 gma-u.5   100786088   transcription factor bHLH147 
 gma-u.5   100792237   transcription factor bHLH147 
 vvi-u.5   100243127   transcription factor bHLH147 
 vvi-u.5   100252798   transcription factor bHLH149-like 
 ppo-u.5   18098569   transcription factor bHLH149 
 ppo-u.5   7485836   transcription factor bHLH147 
 ppo-u.5   7478893   transcription factor bHLH149 
 mtr-u.5   11411718   transcription factor bHLH148 
 mtr-u.5   11415973   transcription factor bHLH147 
 mtr-u.5   25484699   transcription factor bHLH149 
 sly-u.5   101265062   transcription factor bHLH148 
 sly-u.5   101252530   transcription factor bHLH149 
 sot-r.1   102583760   transcription factor bHLH148-like 
 sot-r.1   102584911   transcription factor bHLH149 
 nta-r.1   107773156   transcription factor bHLH149 
 nta-r.1   107795528   transcription factor bHLH148-like 
 nta-r.1   107806261   transcription factor bHLH149-like 
 osa-u.5   4332635   transcription factor bHLH148 
 osa-u.5   107281516   transcription factor bHLH149 
 zma-u.5   100274900   uncharacterized LOC100274900 
 zma-u.5   100303849   uncharacterized LOC100303849 
 tae-r.2   123184678   transcription factor bHLH147-like 
 tae-r.2   123081895   transcription factor bHLH148 
 tae-r.2   123040555   transcription factor bHLH147-like 
 hvu-r.1   123446549   transcription factor bHLH148-like 
 hvu-r.1   123429410   transcription factor bHLH149-like 
 sbi-r.1   8081064   transcription factor bHLH147 
 bdi-r.1   100822091   transcription factor bHLH148 

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Top 50 coexpressed genes to 125606334 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125606334 (bna-r.1 coexpression data)

CoexMap"125606334"


bnaLOC125606334 | Entrez gene ID : 125606334    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 2 2 3 2 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO MF
Protein XP_048631318.1 [sequence] [blastp]
XP_048631319.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  mito_plas 1  (predict for XP_048631318.1)
nucl 7,  chlo 3  (predict for XP_048631319.1)
Subcellular
localization
TargetP
other 3  (predict for XP_048631318.1)
chlo 9  (predict for XP_048631319.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125606334
bna-r.1
for
125593858
bna-r.1
for
125578332
bna-r.1
for
106386675
bra-r.6
for
103833556
bra-r.6
for
103871653
bra-r.6
for
103849832
ath-u.5
for
AT3G06590
ath-u.5
for
AT3G17100
ath-u.5
for
AT1G09250
ghi-r.1
for
107893302
ghi-r.1
for
107893831
ghi-r.1
for
107896604
cit-r.1
for
102614299
cit-r.1
for
102628119
gma-u.5
for
100802046
gma-u.5
for
100786088
gma-u.5
for
100792237
vvi-u.5
for
100243127
vvi-u.5
for
100252798
ppo-u.5
for
18098569
ppo-u.5
for
7485836
ppo-u.5
for
7478893
mtr-u.5
for
11411718
mtr-u.5
for
11415973
mtr-u.5
for
25484699
sly-u.5
for
101265062
sly-u.5
for
101252530
sot-r.1
for
102583760
sot-r.1
for
102584911
nta-r.1
for
107773156
nta-r.1
for
107795528
nta-r.1
for
107806261
osa-u.5
for
4332635
osa-u.5
for
107281516
zma-u.5
for
100274900
zma-u.5
for
100303849
tae-r.2
for
123184678
tae-r.2
for
123081895
tae-r.2
for
123040555
hvu-r.1
for
123446549
hvu-r.1
for
123429410
sbi-r.1
for
8081064
bdi-r.1
for
100822091


Ortholog ID: 1382
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC125593858 LOC106404609 LOC106410241 LOC103870734 LOC103869714 LOC103839579 AT3G06590 AT3G17100 AT1G09250 LOC107893302 LOC107896604 LOC121209358 LOC102614299 LOC102628119 LOC100786088 LOC100783462 LOC100807196 LOC100243127 LOC100252798 LOC18098569 LOC7485836 LOC7478893 LOC11411718 LOC11415973 LOC25484699 LOC101265062 LOC101252530 LOC102583760 LOC102584911 LOC107795528 LOC107806261 LOC107819694 LOC4332635 LOC107281516 LOC100274900 LOC100303849 LOC123184678 LOC123040555 LOC123099957 LOC123446549 LOC123429410 LOC8081064 LOC100822091
Function* transcription factor bHLH148-like transcription factor bHLH147 transcription factor bHLH147-like transcription factor bHLH148 transcription factor bHLH147 transcription factor bHLH147-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein sequence-specific DNA binding transcription factor basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149-like transcription factor bHLH149 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH148 transcription factor bHLH147 transcription factor bHLH149 transcription factor bHLH148 transcription factor bHLH149 transcription factor bHLH148-like transcription factor bHLH149 transcription factor bHLH148-like transcription factor bHLH149-like transcription factor bHLH148 transcription factor bHLH148 transcription factor bHLH149 uncharacterized LOC100274900 uncharacterized LOC100303849 transcription factor bHLH147-like transcription factor bHLH147-like transcription factor bHLH148 transcription factor bHLH148-like transcription factor bHLH149-like transcription factor bHLH147 transcription factor bHLH148
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00062 Fatty acid elongation 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00910 Nitrogen metabolism 2
cit01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr00061 Fatty acid biosynthesis 2
mtr00620 Pyruvate metabolism 2
mtr00640 Propanoate metabolism 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125593858 106404609 106410241 103870734 103869714 103839579 819838 820967 837446 107893302 107896604 121209358 102614299 102628119 100786088 100783462 100807196 100243127 100252798 18098569 7485836 7478893 11411718 11415973 25484699 101265062 101252530 102583760 102584911 107795528 107806261 107819694 4332635 107281516 100274900 100303849 123184678 123040555 123099957 123446549 123429410 8081064 100822091
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