ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G05250	RING/U-box superfamily protein
gma-u.5	100808733	E3 ubiquitin-protein ligase Topors
gma-u.5	100306017	RING zinc finger-containing protein
vvi-u.5	100254480	uncharacterized LOC100254480
ppo-u.5	18109963	uncharacterized LOC18109963
mtr-u.5	11406437	uncharacterized LOC11406437
sly-u.5	101261661	uncharacterized LOC101261661
osa-u.5	4334527	uncharacterized LOC4334527
zma-u.5	100284939	uncharacterized LOC100284939

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0046872 [list] [network] metal ion binding

(6718 genes)

IEA

Protein

XP_048636121.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, cysk 1, nucl_plas 1

(predict for XP_048636121.1)

Subcellular
localization
TargetP

other 7

(predict for XP_048636121.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G05250	gma-u.5 for 100808733	gma-u.5 for 100306017	vvi-u.5 for 100254480	ppo-u.5 for 18109963	mtr-u.5 for 11406437	sly-u.5 for 101261661	osa-u.5 for 4334527	zma-u.5 for 100284939

Ortholog ID: 8441

Species

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC103870837

RING/U-box superfamily protein

uncharacterized LOC107922826

uncharacterized LOC107904710

hypothetical protein

E3 ubiquitin-protein ligase Topors

RING zinc finger-containing protein

uncharacterized LOC100254480

uncharacterized LOC18109963

uncharacterized LOC11406437

uncharacterized LOC101261661

uncharacterized LOC102583028

uncharacterized LOC107829821

uncharacterized LOC107815396

uncharacterized LOC4334527

uncharacterized LOC100284939

uncharacterized LOC123105555

uncharacterized LOC123117350

uncharacterized LOC123452887

uncharacterized LOC8057091

uncharacterized LOC8054603

uncharacterized LOC100821650

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma04814	Motor proteins	2
gma04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma00230	Purine metabolism	2
gma00920	Sulfur metabolism	2
gma01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03018	RNA degradation	2
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi03040	Spliceosome	2
sbi03020	RNA polymerase	2
sbi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03020	RNA polymerase	2
sbi03420	Nucleotide excision repair	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00770	Pantothenate and CoA biosynthesis	2
bdi01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

103870837

819689

107922826

107904710

102607125

100808733

100306017

100254480

18109963

11406437

101261661

102583028

107829821

107815396

4334527

100284939

123105555

123117350

123452887

8057091

8054603

100821650

5718935

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G05250 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G05250 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G05250 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G05250 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**