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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g200651v5   uncharacterized protein 
 ath-u.5   AT3G05250   RING/U-box superfamily protein 
 gma-u.5   100808733   E3 ubiquitin-protein ligase Topors 
 gma-u.5   100306017   RING zinc finger-containing protein 
 sly-u.5   101261661   uncharacterized LOC101261661 
 osa-u.5   4334527   uncharacterized LOC4334527 
 zma-u.5   100284939   uncharacterized LOC100284939 
 bra-r.6   103870837   uncharacterized LOC103870837 
 vvi-u.5   100254480   uncharacterized LOC100254480 
 ppo-u.5   18109963   uncharacterized LOC18109963 
 mtr-u.5   11406437   uncharacterized LOC11406437 
 tae-r.2   123123366   uncharacterized LOC123123366 
 hvu-r.1   123452887   uncharacterized LOC123452887 
 ghi-r.1   107922826   uncharacterized LOC107922826 
 ghi-r.1   107904710   uncharacterized LOC107904710 
 sbi-r.1   8057091   uncharacterized LOC8057091 
 sbi-r.1   8054603   uncharacterized LOC8054603 
 sot-r.1   102583028   uncharacterized LOC102583028 
 cit-r.1   102607125   hypothetical protein 
 bdi-r.1   100821650   uncharacterized LOC100821650 
 nta-r.1   107829821   uncharacterized LOC107829821 
 nta-r.1   107815396   uncharacterized LOC107815396 

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Top 50 coexpressed genes to CHLRE_03g200651v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g200651v5 (cre-r.1 coexpression data)

CoexMap"5718935"


creCHLRE_03g200651v5 | Entrez gene ID : 5718935    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi sbi sot cit bdi nta bna
Paralog 1 1 2 1 1 1 1 1 1 1 1 1 2 2 1 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_042926575.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1  (predict for XP_042926575.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042926575.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g200651v5
ath-u.5
for
AT3G05250
gma-u.5
for
100808733
gma-u.5
for
100306017
sly-u.5
for
101261661
osa-u.5
for
4334527
zma-u.5
for
100284939
bra-r.6
for
103870837
vvi-u.5
for
100254480
ppo-u.5
for
18109963
mtr-u.5
for
11406437
tae-r.2
for
123123366
hvu-r.1
for
123452887
ghi-r.1
for
107922826
ghi-r.1
for
107904710
sbi-r.1
for
8057091
sbi-r.1
for
8054603
sot-r.1
for
102583028
cit-r.1
for
102607125
bdi-r.1
for
100821650
nta-r.1
for
107829821
nta-r.1
for
107815396


Ortholog ID: 8441
Species cre ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi sbi sbi sot cit bdi nta nta
Symbol CHLRE_03g200651v5 AT3G05250 LOC100808733 LOC100306017 LOC101261661 LOC4334527 LOC100284939 LOC103870837 LOC100254480 LOC18109963 LOC11406437 LOC123105555 LOC123117350 LOC123452887 LOC107922826 LOC107904710 LOC8057091 LOC8054603 LOC102583028 LOC102607125 LOC100821650 LOC107829821 LOC107815396
Function* uncharacterized protein RING/U-box superfamily protein E3 ubiquitin-protein ligase Topors RING zinc finger-containing protein uncharacterized LOC101261661 uncharacterized LOC4334527 uncharacterized LOC100284939 uncharacterized LOC103870837 uncharacterized LOC100254480 uncharacterized LOC18109963 uncharacterized LOC11406437 uncharacterized LOC123105555 uncharacterized LOC123117350 uncharacterized LOC123452887 uncharacterized LOC107922826 uncharacterized LOC107904710 uncharacterized LOC8057091 uncharacterized LOC8054603 uncharacterized LOC102583028 hypothetical protein uncharacterized LOC100821650 uncharacterized LOC107829821 uncharacterized LOC107815396
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
gma04814 Motor proteins 2
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma00230 Purine metabolism 2
gma00920 Sulfur metabolism 2
gma01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
sbi03420 Nucleotide excision repair 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00770 Pantothenate and CoA biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5718935 819689 100808733 100306017 101261661 4334527 100284939 103870837 100254480 18109963 11406437 123105555 123117350 123452887 107922826 107904710 8057091 8054603 102583028 102607125 100821650 107829821 107815396
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