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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   127900959   RING-H2 finger protein ATL74-like 
 cit-r.1   102624464   RING-H2 finger protein ATL39 
 cit-r.1   102609930   RING-H2 finger protein ATL38-like 
 ghi-r.1   107930465   RING-H2 finger protein ATL2 
 gma-u.5   100790202   RING-H2 finger protein ATL5 
 gma-u.5   100794979   RING-H2 finger protein ATL38 
 gma-u.5   100800505   RING-H2 finger protein ATL39 
 vvi-u.5   100267800   RING-H2 finger protein ATL38 
 vvi-u.5   100267780   RING-H2 finger protein ATL8 
 ppo-u.5   7494898   RING-H2 finger protein ATL8 
 ppo-u.5   7464902   RING-H2 finger protein ATL7 
 ppo-u.5   7494034   RING-H2 finger protein ATL39 
 mtr-u.5   25485819   RING-H2 finger protein ATL8 
 mtr-u.5   11432107   RING-H2 finger protein ATL5 
 mtr-u.5   25500957   RING-H2 finger protein ATL39 
 sly-u.5   101263351   RING-H2 finger protein ATL64 
 sly-u.5   101268474   RING-H2 finger protein ATL39-like 
 sly-u.5   101252244   RING-H2 finger protein ATL38-like 
 sot-r.1   102594380   RING-H2 finger protein ATL64-like 
 sot-r.1   102606063   RING-H2 finger protein ATL28-like 
 sot-r.1   102604126   RING-H2 finger protein ATL38-like 
 nta-r.1   107826869   RING-H2 finger protein ATL34 
 nta-r.1   107801654   RING-H2 finger protein ATL67 
 nta-r.1   107800531   RING-H2 finger protein ATL67 
 osa-u.5   9271312   putative RING-H2 finger protein ATL71 
 osa-u.5   9270933   RING-H2 finger protein ATL80 
 osa-u.5   9266460   RING-H2 finger protein ATL2 
 zma-u.5   103653907   RING-H2 finger protein ATL72 
 zma-u.5   100281828   RING-H2 finger protein ATL2M 
 zma-u.5   100274803   putative RING zinc finger domain superfamily protein 
 tae-r.2   123054131   putative RING-H2 finger protein ATL69 
 tae-r.2   123046262   putative RING-H2 finger protein ATL69 
 hvu-r.1   123452635   RING-H2 finger protein ATL67-like 
 hvu-r.1   123404789   RING-H2 finger protein ATL73-like 
 hvu-r.1   123427457   putative RING-H2 finger protein ATL69 
 sbi-r.1   8073905   RING-H2 finger protein ATL72 
 sbi-r.1   8070627   RING-H2 finger protein ATL8 
 sbi-r.1   8060407   RING-H2 finger protein ATL39 
 bdi-r.1   100839220   RING-H2 finger protein ATL80 
 bdi-r.1   100821454   RING-H2 finger protein ATL67 
 bdi-r.1   100823078   putative RING-H2 finger protein ATL69 

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Top 50 coexpressed genes to 127900959 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 127900959 (cit-r.1 coexpression data)

CoexMap"127900959"


citLOC127900959 | Entrez gene ID : 127900959    
Species cit ghi gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bra bna ath
Paralog 3 1 3 2 3 3 3 3 3 3 3 2 3 3 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_052292436.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 3,  vacu 1,  chlo_mito 1  (predict for XP_052292436.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_052292436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
127900959
cit-r.1
for
102624464
cit-r.1
for
102609930
ghi-r.1
for
107930465
gma-u.5
for
100790202
gma-u.5
for
100794979
gma-u.5
for
100800505
vvi-u.5
for
100267800
vvi-u.5
for
100267780
ppo-u.5
for
7494898
ppo-u.5
for
7464902
ppo-u.5
for
7494034
mtr-u.5
for
25485819
mtr-u.5
for
11432107
mtr-u.5
for
25500957
sly-u.5
for
101263351
sly-u.5
for
101268474
sly-u.5
for
101252244
sot-r.1
for
102594380
sot-r.1
for
102606063
sot-r.1
for
102604126
nta-r.1
for
107826869
nta-r.1
for
107801654
nta-r.1
for
107800531
osa-u.5
for
9271312
osa-u.5
for
9270933
osa-u.5
for
9266460
zma-u.5
for
103653907
zma-u.5
for
100281828
zma-u.5
for
100274803
tae-r.2
for
123054131
tae-r.2
for
123046262
hvu-r.1
for
123452635
hvu-r.1
for
123404789
hvu-r.1
for
123427457
sbi-r.1
for
8073905
sbi-r.1
for
8070627
sbi-r.1
for
8060407
bdi-r.1
for
100839220
bdi-r.1
for
100821454
bdi-r.1
for
100823078


Ortholog ID: 1776
Species cit cit cit ghi ghi gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC127900959 LOC102624464 LOC102609930 LOC107930465 LOC107921191 LOC100794979 LOC100810553 LOC100780922 LOC100267800 LOC100267780 LOC7464902 LOC7494034 LOC7477186 LOC25485819 LOC11432107 LOC25500957 LOC101263351 LOC101268474 LOC101252244 LOC102594380 LOC102606063 LOC102604126 LOC107801654 LOC107790345 LOC107764016 LOC9271312 LOC9266460 LOC4330304 LOC103653907 LOC100274803 LOC100274339 LOC123086356 LOC123111186 LOC123190024 LOC123452635 LOC123427457 LOC8073905 LOC8058634 LOC8066959 LOC100839220 LOC100823078 LOC100832002
Function* RING-H2 finger protein ATL74-like RING-H2 finger protein ATL39 RING-H2 finger protein ATL38-like RING-H2 finger protein ATL2 RING-H2 finger protein ATL2 RING-H2 finger protein ATL38 RING-H2 finger protein ATL39 RING-H2 finger protein ATL7-like RING-H2 finger protein ATL38 RING-H2 finger protein ATL8 RING-H2 finger protein ATL7 RING-H2 finger protein ATL39 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL5 RING-H2 finger protein ATL39 RING-H2 finger protein ATL64 RING-H2 finger protein ATL39-like RING-H2 finger protein ATL38-like RING-H2 finger protein ATL64-like RING-H2 finger protein ATL28-like RING-H2 finger protein ATL38-like RING-H2 finger protein ATL67 RING-H2 finger protein ATL38-like RING-H2 finger protein ATL2-like putative RING-H2 finger protein ATL71 RING-H2 finger protein ATL2 E3 ubiquitin-protein ligase ATL59 RING-H2 finger protein ATL72 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein E3 ubiquitin-protein ligase EL5 RING-H2 finger protein ATL67 putative RING-H2 finger protein ATL69 RING-H2 finger protein ATL67-like putative RING-H2 finger protein ATL69 RING-H2 finger protein ATL72 E3 ubiquitin-protein ligase Os03g0188200 RING-H2 finger protein ATL2 RING-H2 finger protein ATL80 putative RING-H2 finger protein ATL69 putative RING-H2 finger protein ATL69
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 3
ghi01310 Nitrogen cycle 3
ghi04016 MAPK signaling pathway - plant 3
ghi04075 Plant hormone signal transduction 3
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr04142 Lysosome 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 6
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00071 Fatty acid degradation 2
sot00350 Tyrosine metabolism 2
sot00620 Pyruvate metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa00250 Alanine, aspartate and glutamate metabolism 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00541 Biosynthesis of various nucleotide sugars 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 4
sbi00620 Pyruvate metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00561 Glycerolipid metabolism 2
bdi00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 127900959 102624464 102609930 107930465 107921191 100794979 100810553 100780922 100267800 100267780 7464902 7494034 7477186 25485819 11432107 25500957 101263351 101268474 101252244 102594380 102606063 102604126 107801654 107790345 107764016 9271312 9266460 4330304 103653907 100274803 100274339 123086356 123111186 123190024 123452635 123427457 8073905 8058634 8066959 100839220 100823078 100832002
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