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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7474421   uncharacterized LOC7474421 
 gma-u.5   100803254   uncharacterized LOC100803254 
 gma-u.5   100802755   uncharacterized LOC100802755 
 mtr-u.5   11406144   uncharacterized LOC11406144 
 ath-u.5   AT3G56010   uncharacterized protein 
 vvi-u.5   100255332   uncharacterized LOC100255332 
 sly-u.5   101259619   uncharacterized LOC101259619 
 osa-u.5   4332516   uncharacterized LOC4332516 
 zma-u.5   100382352   uncharacterized LOC100382352 

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Top 50 coexpressed genes to 7474421 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7474421 (ppo-u.5 coexpression data)

CoexMap"127903920"


ppoLOC127903920 | Entrez gene ID : 127903920    
Species ppo gma mtr ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (105 genes)  IEA  
GO MF
Protein XP_052311260.1 [sequence] [blastp]
XP_052311261.1 [sequence] [blastp]
XP_052311262.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_052311260.1)
chlo 4,  nucl 2,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for XP_052311261.1)
chlo 4,  nucl 2,  mito 1,  cyto_nucl 1,  nucl_plas 1  (predict for XP_052311262.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_052311260.1)
other 5,  mito 5  (predict for XP_052311261.1)
other 5,  mito 5  (predict for XP_052311262.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7474421
gma-u.5
for
100803254
gma-u.5
for
100802755
mtr-u.5
for
11406144
ath-u.5
for
AT3G56010
vvi-u.5
for
100255332
sly-u.5
for
101259619
osa-u.5
for
4332516
zma-u.5
for
100382352


Ortholog ID: 8509
Species ppo gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC7474421 LOC100803254 LOC100802755 LOC11406144 AT3G56010 LOC103863124 LOC100255332 LOC107957302 LOC107955191 LOC106445326 LOC106368118 LOC102624918 LOC101259619 LOC102605110 LOC107780363 LOC107762811 LOC4332516 LOC100382352 LOC123085583 LOC123097771 LOC123448902 LOC8084716 LOC104581802
Function* uncharacterized LOC7474421 uncharacterized LOC100803254 uncharacterized LOC100802755 uncharacterized LOC11406144 uncharacterized protein uncharacterized LOC103863124 uncharacterized LOC100255332 uncharacterized LOC107957302 uncharacterized LOC107955191 uncharacterized LOC106445326 uncharacterized LOC106368118 hypothetical protein uncharacterized LOC101259619 uncharacterized LOC102605110 uncharacterized LOC107780363 uncharacterized LOC107762811 uncharacterized LOC4332516 uncharacterized LOC100382352 uncharacterized LOC123085583 uncharacterized LOC123097771 uncharacterized LOC123448902 translation initiation factor IF-2 uncharacterized LOC104581802
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00010 Glycolysis / Gluconeogenesis 2
gma00051 Fructose and mannose metabolism 2
gma00562 Inositol phosphate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa00710 Carbon fixation by Calvin cycle 4
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 7
sbi00710 Carbon fixation by Calvin cycle 3
sbi01200 Carbon metabolism 3
sbi00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7474421 100803254 100802755 11406144 824767 103863124 100255332 107957302 107955191 106445326 106368118 102624918 101259619 102605110 107780363 107762811 4332516 100382352 123085583 123097771 123448902 8084716 104581802
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