ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	ABCD1	peroxisomal ABC transporter 1
gma-u.5	100813765	ABC transporter D family member 1
gma-u.5	100796571	ABC transporter D family member 1
gma-u.5	100791623	ABC transporter D family member 1
ppo-u.5	7471510	ABC transporter D family member 1
ppo-u.5	18100943	ABC transporter D family member 1
mtr-u.5	11417619	ABC transporter D family member 1
sly-u.5	ABCD1	ABC transporter D family member 1
osa-u.5	4337574	ABC transporter D family member 1
osa-u.5	4324471	ABC transporter D family member 1
zma-u.5	100502226	uncharacterized LOC100502226
zma-u.5	100383831	uncharacterized LOC100383831

functional annotation

KEGG

vvi02010 [list] [network] ABC transporters (85 genes)

vvi04146 [list] [network] Peroxisome (75 genes)

GO BP

GO:0015910 [list] [network] long-chain fatty acid import into peroxisome	(1 genes)	IEA
GO:0042760 [list] [network] very long-chain fatty acid catabolic process	(1 genes)	IEA
GO:0006635 [list] [network] fatty acid beta-oxidation	(19 genes)	IEA
GO:0007031 [list] [network] peroxisome organization	(25 genes)	IEA

GO CC

GO:0005778 [list] [network] peroxisomal membrane

(26 genes)

IEA

GO MF

GO:0005324 [list] [network] long-chain fatty acid transmembrane transporter activity	(1 genes)	IEA
GO:0140359 [list] [network] ABC-type transporter activity	(122 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(487 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA

Protein

XP_059594461.1 [sequence] [blastp]
XP_059594462.1 [sequence] [blastp]
XP_059594463.1 [sequence] [blastp]
XP_059594464.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, chlo 2, mito 1, E.R. 1, pero 1, cyto_mito 1	(predict for XP_059594461.1)
plas 5, chlo 2, mito 1, E.R. 1, pero 1, cyto_mito 1	(predict for XP_059594462.1)
plas 5, chlo 2, mito 1, E.R. 1, pero 1, cyto_mito 1	(predict for XP_059594463.1)
plas 5, chlo 2, mito 1, E.R. 1, pero 1, cyto_mito 1	(predict for XP_059594464.1)

Subcellular
localization
TargetP

mito 9	(predict for XP_059594461.1)
mito 9	(predict for XP_059594462.1)
mito 9	(predict for XP_059594463.1)
mito 9	(predict for XP_059594464.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for ABCD1	gma-u.5 for 100813765	gma-u.5 for 100796571	gma-u.5 for 100791623	ppo-u.5 for 7471510	ppo-u.5 for 18100943	mtr-u.5 for 11417619	sly-u.5 for ABCD1	osa-u.5 for 4337574	osa-u.5 for 4324471	zma-u.5 for 100502226	zma-u.5 for 100383831

Ortholog ID: 4117

Species

ath

gma

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ABCD1

ABCD1

Function^*

peroxisomal ABC transporter 1

ABC transporter D family member 1

uncharacterized LOC100383831

uncharacterized LOC100502226

ABC transporter D family member 1

ABC transporter D family member 1-like

ABC transporter D family member 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	3
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	3
gma02010	ABC transporters	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2
ppo03013	Nucleocytoplasmic transport	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04146	Peroxisome	3
mtr00071	Fatty acid degradation	3
mtr01212	Fatty acid metabolism	3
mtr04814	Motor proteins	2
mtr00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	6
ghi04146	Peroxisome	6
ghi04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi02010	ABC transporters	6
ghi04146	Peroxisome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	4
bna04146	Peroxisome	3
bna03015	mRNA surveillance pathway	2
bna04142	Lysosome	2
bna00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna02010	ABC transporters	4
bna04146	Peroxisome	3
bna03015	mRNA surveillance pathway	2
bna04142	Lysosome	2
bna00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04146	Peroxisome	4
sly00562	Inositol phosphate metabolism	3
sly04070	Phosphatidylinositol signaling system	2
sly04120	Ubiquitin mediated proteolysis	2
sly00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04146	Peroxisome	4
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4
nta04146	Peroxisome	4
nta00071	Fatty acid degradation	2
nta00410	beta-Alanine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	5
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	4
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01200	Carbon metabolism	6
cre00071	Fatty acid degradation	3
cre01212	Fatty acid metabolism	3
cre04146	Peroxisome	3
cre00630	Glyoxylate and dicarboxylate metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

830144

100791623

100796571

7471510

18100943

11417619

107898484

107950463

106382600

106361371

102617705

101260717

102587630

107770907

107801433

4324471

4337574

100383831

100502226

123061782

123089959

123431289

123445636

8066604

8074123

100828676

100823561

5726700

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to ABCD1 (ath-u.5 coexpression data)

Top 50 enrichment test to ABCD1 (ath-u.5 coexpression data)


Species	ath	gma	ppo	mtr	sly	osa	zma	hvu	vvi	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	3	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to ABCD1 (ath-u.5 coexpression data)

Top 50 enrichment test to ABCD1 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**