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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123190442   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123054576   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 tae-r.2   123046730   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 zma-u.5   103640772   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sbi-r.1   8079838   pentatricopeptide repeat-containing protein At5g04780 
 ath-u.5   AT5G04780   Pentatricopeptide repeat (PPR) superfamily protein 
 sly-u.5   101245222   pentatricopeptide repeat-containing protein 
 mtr-u.5   25485552   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107941409   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 sot-r.1   102597631   pentatricopeptide repeat-containing protein At5g04780 
 cit-r.1   102626818   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 nta-r.1   107779420   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 
 nta-r.1   107775155   pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like 

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Top 50 coexpressed genes to 123190442 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123190442 (tae-r.2 coexpression data)

CoexMap""


osaLOC136351068 | Entrez gene ID : 136351068    
Species tae zma sbi ath sly mtr ghi sot cit nta bra hvu gma ppo vvi bdi osa cre bna
Paralog 3 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At5g04780, mitochondrial
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (840 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_025877951.1 [sequence] [blastp]
XP_066162247.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_025877951.1)
chlo 6,  extr 1,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_066162247.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_025877951.1)
mito 6  (predict for XP_066162247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123190442
tae-r.2
for
123054576
tae-r.2
for
123046730
zma-u.5
for
103640772
sbi-r.1
for
8079838
ath-u.5
for
AT5G04780
sly-u.5
for
101245222
mtr-u.5
for
25485552
ghi-r.1
for
107941409
sot-r.1
for
102597631
cit-r.1
for
102626818
nta-r.1
for
107779420
nta-r.1
for
107775155

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Ortholog ID: 11726
Species tae tae tae zma sbi ath sly mtr ghi sot cit nta nta
Symbol LOC123190442 LOC123054576 LOC123046730 LOC103640772 LOC8079838 AT5G04780 LOC101245222 LOC25485552 LOC107941409 LOC102597631 LOC102626818 LOC107779420 LOC107775155
Function* pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780 pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123190442 123054576 123046730 103640772 8079838 830356 101245222 25485552 107941409 102597631 102626818 107779420 107775155
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