ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101245491	nuclear transport factor 2
sly-u.5	101245798	nuclear transport factor 2
sot-r.1	102594129	putative G3BP-like protein
sot-r.1	102583564	ras GTPase-activating protein-binding protein 2-like
sot-r.1	102582243	putative G3BP-like protein
nta-r.1	107788677	nuclear transport factor 2-like
nta-r.1	107781059	nuclear transport factor 2-like
nta-r.1	107799286	nuclear transport factor 2
ath-u.5	AT2G03640	Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
ath-u.5	AT3G25150	Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
ath-u.5	AT5G43960	Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
gma-u.5	100812165	nuclear transport factor 2
gma-u.5	100816544	nuclear transport factor 2
gma-u.5	100816288	nuclear transport factor 2
bra-r.6	103839214	nuclear transport factor 2
bra-r.6	103854928	nuclear transport factor 2
bra-r.6	103860560	nuclear transport factor 2
vvi-u.5	100249710	nuclear transport factor 2
vvi-u.5	100250757	nuclear transport factor 2
vvi-u.5	100255231	nuclear transport factor 2
ppo-u.5	7498214	nuclear transport factor 2
ppo-u.5	7475423	nuclear transport factor 2
mtr-u.5	11431097	nuclear transport factor 2
mtr-u.5	11446183	nuclear transport factor 2
mtr-u.5	11446469	nuclear transport factor 2
ghi-r.1	107946550	nuclear transport factor 2
ghi-r.1	107940136	nuclear transport factor 2
ghi-r.1	107932166	nuclear transport factor 2
bna-r.1	111210019	nuclear transport factor 2-like
bna-r.1	106382190	nuclear transport factor 2
bna-r.1	125609828	nuclear transport factor 2-like
cit-r.1	102613965	nuclear transport factor 2
cit-r.1	102609497	nuclear transport factor 2-like
osa-u.5	4335600	nuclear transport factor 2
osa-u.5	4328199	nuclear transport factor 2
osa-u.5	4343835	nuclear transport factor 2
zma-u.5	100382436	Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
zma-u.5	100282288	uncharacterized LOC100282288
zma-u.5	100382927	uncharacterized LOC100382927
tae-r.2	123164709	nuclear transport factor 2
tae-r.2	100682411	nuclear transport factor 2
hvu-r.1	123445065	nuclear transport factor 2-like
hvu-r.1	123429718	nuclear transport factor 2-like
hvu-r.1	123426482	nuclear transport factor 2-like
sbi-r.1	110432942	ras GTPase-activating protein-binding protein 2
sbi-r.1	8056061	ras GTPase-activating protein-binding protein 1
sbi-r.1	8066039	ras GTPase-activating protein-binding protein 1
bdi-r.1	100842774	ras GTPase-activating protein-binding protein 1
bdi-r.1	100824546	putative G3BP-like protein
bdi-r.1	100844531	putative G3BP-like protein
cre-r.1	CHLRE_02g092400v5	uncharacterized protein

Top 50 coexpressed genes to 101245491 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101245491 (sly-u.5 coexpression data)

CoexMap"138342043"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:1990904 [list] [network] ribonucleoprotein complex	(566 genes)	IEA
GO:0005829 [list] [network] cytosol	(916 genes)	IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(315 genes)

IEA

Protein

XP_069150326.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, plas 1, extr 1

(predict for XP_069150326.1)

Subcellular
localization
TargetP

other 8

(predict for XP_069150326.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101245491	sly-u.5 for 101245798	sot-r.1 for 102594129	sot-r.1 for 102583564	sot-r.1 for 102582243	nta-r.1 for 107788677	nta-r.1 for 107781059	nta-r.1 for 107799286	ath-u.5 for AT2G03640	ath-u.5 for AT3G25150	ath-u.5 for AT5G43960	gma-u.5 for 100812165	gma-u.5 for 100816544	gma-u.5 for 100816288	bra-r.6 for 103839214	bra-r.6 for 103854928	bra-r.6 for 103860560	vvi-u.5 for 100249710	vvi-u.5 for 100250757	vvi-u.5 for 100255231	ppo-u.5 for 7498214	ppo-u.5 for 7475423	mtr-u.5 for 11431097	mtr-u.5 for 11446183	mtr-u.5 for 11446469	ghi-r.1 for 107946550	ghi-r.1 for 107940136	ghi-r.1 for 107932166	bna-r.1 for 111210019	bna-r.1 for 106382190	bna-r.1 for 125609828	cit-r.1 for 102613965	cit-r.1 for 102609497	osa-u.5 for 4335600	osa-u.5 for 4328199	osa-u.5 for 4343835	zma-u.5 for 100382436	zma-u.5 for 100282288	zma-u.5 for 100382927	tae-r.2 for 123164709	tae-r.2 for 100682411	hvu-r.1 for 123445065	hvu-r.1 for 123429718	hvu-r.1 for 123426482	sbi-r.1 for 110432942	sbi-r.1 for 8056061	sbi-r.1 for 8066039	bdi-r.1 for 100842774	bdi-r.1 for 100824546	bdi-r.1 for 100844531	cre-r.1 for CHLRE_02g092400v5

Ortholog

Ortholog ID: 346

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

nuclear transport factor 2