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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142161642   putative pentatricopeptide repeat-containing protein At5g37570 
 nta-r.1   107807813   putative pentatricopeptide repeat-containing protein At5g37570 
 sly-u.5   104644453   putative pentatricopeptide repeat-containing protein At5g37570 
 sot-r.1   102578717   putative pentatricopeptide repeat-containing protein At5g37570 
 ath-u.5   AT5G37570   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100795649   putative pentatricopeptide repeat-containing protein At5g37570 
 bra-r.6   103863731   putative pentatricopeptide repeat-containing protein At5g37570 
 vvi-u.5   100261353   putative pentatricopeptide repeat-containing protein At5g37570 
 ppo-u.5   7466015   putative pentatricopeptide repeat-containing protein At5g37570 
 mtr-u.5   25499433   putative pentatricopeptide repeat-containing protein At5g37570 
 mtr-u.5   25499426   putative pentatricopeptide repeat-containing protein At5g37570 
 ghi-r.1   107925520   putative pentatricopeptide repeat-containing protein At5g37570 
 ghi-r.1   107928140   putative pentatricopeptide repeat-containing protein At5g37570 
 ghi-r.1   107885971   putative pentatricopeptide repeat-containing protein At5g37570 
 cit-r.1   102629189   putative pentatricopeptide repeat-containing protein At5g37570 
 osa-u.5   4335800   putative pentatricopeptide repeat-containing protein At5g37570 
 zma-u.5   100277370   uncharacterized LOC100277370 
 hvu-r.1   123426676   putative pentatricopeptide repeat-containing protein At5g37570 
 sbi-r.1   8072995   putative pentatricopeptide repeat-containing protein At5g37570 
 bdi-r.1   100840878   putative pentatricopeptide repeat-containing protein At5g37570 

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Top 50 coexpressed genes to 142161642 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142161642 (nta-r.1 coexpression data)

CoexMap"142161642"


ntaLOC142161642 | Entrez gene ID : 142161642    
Species nta sly sot ath gma bra vvi ppo mtr ghi cit osa zma hvu sbi bdi cre tae bna
Paralog 2 1 1 1 1 1 1 1 2 3 1 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016440656.1 [sequence] [blastp]
XP_075074322.1 [sequence] [blastp]
XP_075074323.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016440656.1)
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_075074322.1)
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_075074323.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_016440656.1)
scret 7  (predict for XP_075074322.1)
scret 7  (predict for XP_075074323.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142161642
nta-r.1
for
107807813
sly-u.5
for
104644453
sot-r.1
for
102578717
ath-u.5
for
AT5G37570
gma-u.5
for
100795649
bra-r.6
for
103863731
vvi-u.5
for
100261353
ppo-u.5
for
7466015
mtr-u.5
for
25499433
mtr-u.5
for
25499426
ghi-r.1
for
107925520
ghi-r.1
for
107928140
ghi-r.1
for
107885971
cit-r.1
for
102629189
osa-u.5
for
4335800
zma-u.5
for
100277370
hvu-r.1
for
123426676
sbi-r.1
for
8072995
bdi-r.1
for
100840878


Ortholog ID: 10336
Species nta nta sly sot ath gma bra vvi ppo mtr mtr ghi ghi ghi cit osa zma hvu sbi bdi
Symbol LOC142161642 LOC107807813 LOC104644453 LOC102578717 AT5G37570 LOC100795649 LOC103863731 LOC100261353 LOC7466015 LOC25499433 LOC25499426 LOC107925520 LOC107928140 LOC107885971 LOC102629189 LOC4335800 LOC100277370 LOC123426676 LOC8072995 LOC100840878
Function* putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 Pentatricopeptide repeat (PPR-like) superfamily protein putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 uncharacterized LOC100277370 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570 putative pentatricopeptide repeat-containing protein At5g37570
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta03018 RNA degradation 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa00970 Aminoacyl-tRNA biosynthesis 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142161642 107807813 104644453 102578717 833735 100795649 103863731 100261353 7466015 25499433 25499426 107925520 107928140 107885971 102629189 4335800 100277370 123426676 8072995 100840878
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