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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142173290   polygalacturonase-like 
 nta-r.1   142173293   polygalacturonase-like 
 sly-u.5   101249539   polygalacturonase-like 
 ath-u.5   AT3G14040   Pectin lyase-like superfamily protein 
 ath-u.5   AT5G48140   Pectin lyase-like superfamily protein 
 gma-u.5   100810484   exopolygalacturonase 
 vvi-u.5   100265436   exopolygalacturonase 
 mtr-u.5   25488062   exopolygalacturonase 
 bna-r.1   106385399   exopolygalacturonase clone GBGE184 
 osa-u.5   4341515   exopolygalacturonase 
 osa-u.5   4323970   exopolygalacturonase 
 osa-u.5   4328617   exopolygalacturonase 
 zma-u.5   103626843   exopolygalacturonase-like 
 zma-u.5   100273946   uncharacterized LOC100273946 
 tae-r.2   123166690   exopolygalacturonase 
 tae-r.2   123148487   exopolygalacturonase 
 tae-r.2   123160455   exopolygalacturonase 

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Top 50 coexpressed genes to 142173290 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142173290 (nta-r.1 coexpression data)

CoexMap"142173290"


ntaLOC142173290 | Entrez gene ID : 142173290    
Species nta sly ath gma vvi mtr bna osa zma tae bra sot cre ghi sbi cit ppo hvu bdi
Paralog 2 1 2 1 1 1 1 3 2 3 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00040 [list] [network] Pentose and glucuronate interconversions (239 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1425 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (108 genes)  IEA  
Protein XP_075094629.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_075094629.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_075094629.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142173290
nta-r.1
for
142173293
sly-u.5
for
101249539
ath-u.5
for
AT3G14040
ath-u.5
for
AT5G48140
gma-u.5
for
100810484
vvi-u.5
for
100265436
mtr-u.5
for
25488062
bna-r.1
for
106385399
osa-u.5
for
4341515
osa-u.5
for
4323970
osa-u.5
for
4328617
zma-u.5
for
103626843
zma-u.5
for
100273946
tae-r.2
for
123166690
tae-r.2
for
123148487
tae-r.2
for
123160455


Ortholog ID: 84
Species nta nta nta sly sly ath gma ghi bna bna osa osa zma zma zma tae tae tae
Symbol LOC107822352 LOC107769351 LOC107768349 LOC101249539 LOC101263150 AT3G07820 LOC100779556 LOC121221131 LOC106388994 LOC106427912 LOC4341515 LOC4323970 LOC100273946 LOC118472226 LOC118472225 LOC123144207 LOC123168013 LOC123152443
Function* exopolygalacturonase clone GBGE184-like polygalacturonase-like polygalacturonase-like polygalacturonase-like exopolygalacturonase-like Pectin lyase-like superfamily protein polygalacturonase polygalacturonase-like polygalacturonase-like polygalacturonase-like exopolygalacturonase exopolygalacturonase uncharacterized LOC100273946 exopolygalacturonase exopolygalacturonase exopolygalacturonase exopolygalacturonase exopolygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
nta00740 Riboflavin metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107822352 107769351 107768349 101249539 101263150 819973 100779556 121221131 106388994 106427912 4341515 4323970 100273946 118472226 118472225 123144207 123168013 123152443
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