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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142179357   gibberellin receptor GID1B-like 
 nta-r.1   107776835   gibberellin receptor GID1C 
 nta-r.1   107798341   gibberellin receptor GID1B 
 nta-r.1   107831490   gibberellin receptor GID1B 
 sly-u.5   GID1b-2   gibberellin receptor GID1b-2 
 sly-u.5   GID1b-1   gibberellin receptor GID1b-1 
 sly-u.5   GID1ac   gibberellin receptor GID1ac 
 sot-r.1   102604924   gibberellin receptor GID1B-like 
 sot-r.1   102579350   gibberellin receptor GID1B-like 
 ath-u.5   GID1A   alpha/beta-Hydrolases superfamily protein 
 ath-u.5   GID1B   alpha/beta-Hydrolases superfamily protein 
 ath-u.5   GID1C   alpha/beta-Hydrolases superfamily protein 
 gma-u.5   GID1C2   gibberellin receptor GID1C 
 gma-u.5   100804463   gibberellin receptor GID1B 
 gma-u.5   100788435   gibberellin receptor GID1B 
 bra-r.6   103830382   gibberellin receptor GID1B 
 bra-r.6   103874547   gibberellin receptor GID1C 
 bra-r.6   103870853   gibberellin receptor GID1A 
 vvi-u.5   100249385   gibberellin receptor GID1B 
 ppo-u.5   7458234   gibberellin receptor GID1B 
 ppo-u.5   18098845   gibberellin receptor GID1C 
 ppo-u.5   7457976   gibberellin receptor GID1B 
 mtr-u.5   11405609   gibberellin receptor GID1C 
 mtr-u.5   11437344   gibberellin receptor GID1B 
 mtr-u.5   11416837   gibberellin receptor GID1B 
 ghi-r.1   107893263   gibberellin receptor GID1C-like 
 ghi-r.1   107893264   gibberellin receptor GID1C 
 ghi-r.1   107888298   gibberellin receptor GID1C 
 bna-r.1   106393551   gibberellin receptor GID1B-like 
 bna-r.1   106375236   gibberellin receptor GID1B 
 bna-r.1   106353329   gibberellin receptor GID1B-like 
 cit-r.1   102619373   gibberellin receptor GID1C 
 cit-r.1   102618248   gibberellin receptor GID1B 
 osa-u.5   4338764   gibberellin receptor GID1-like 
 zma-u.5   100216730   Gibberellin receptor GID1A 
 zma-u.5   103630348   gibberellin receptor GID1-like 
 tae-r.2   123181987   gibberellin receptor GID1 
 tae-r.2   123055338   gibberellin receptor GID1 
 tae-r.2   123132455   gibberellin receptor GID1 
 hvu-r.1   123441390   gibberellin receptor GID1-like 
 sbi-r.1   110430265   gibberellin receptor GID1-like 
 bdi-r.1   100840216   gibberellin receptor GID1 

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Top 50 coexpressed genes to 142179357 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142179357 (nta-r.1 coexpression data)

CoexMap"142179357"


ntaLOC142179357 | Entrez gene ID : 142179357    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 1 3 3 3 3 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta04075 [list] [network] Plant hormone signal transduction (826 genes)
GO BP
GO:0009939 [list] [network] positive regulation of gibberellic acid mediated signaling pathway  (8 genes)  IEA  
GO:0010325 [list] [network] raffinose family oligosaccharide biosynthetic process  (8 genes)  IEA  
GO:0048444 [list] [network] floral organ morphogenesis  (8 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0010331 [list] [network] gibberellin binding  (8 genes)  IEA  
GO:0016787 [list] [network] hydrolase activity  (6247 genes)  IEA  
Protein XP_075105174.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  mito 1,  cysk 1,  nucl_plas 1  (predict for XP_075105174.1)
Subcellular
localization
TargetP
other 6  (predict for XP_075105174.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142179357
nta-r.1
for
107776835
nta-r.1
for
107798341
nta-r.1
for
107831490
sly-u.5
for
GID1b-2
sly-u.5
for
GID1b-1
sly-u.5
for
GID1ac
sot-r.1
for
102604924
sot-r.1
for
102579350
ath-u.5
for
GID1A
ath-u.5
for
GID1B
ath-u.5
for
GID1C
gma-u.5
for
GID1C2
gma-u.5
for
100804463
gma-u.5
for
100788435
bra-r.6
for
103830382
bra-r.6
for
103874547
bra-r.6
for
103870853
vvi-u.5
for
100249385
ppo-u.5
for
7458234
ppo-u.5
for
18098845
ppo-u.5
for
7457976
mtr-u.5
for
11405609
mtr-u.5
for
11437344
mtr-u.5
for
11416837
ghi-r.1
for
107893263
ghi-r.1
for
107893264
ghi-r.1
for
107888298
bna-r.1
for
106393551
bna-r.1
for
106375236
bna-r.1
for
106353329
cit-r.1
for
102619373
cit-r.1
for
102618248
osa-u.5
for
4338764
zma-u.5
for
100216730
zma-u.5
for
103630348
tae-r.2
for
123181987
tae-r.2
for
123055338
tae-r.2
for
123132455
hvu-r.1
for
123441390
sbi-r.1
for
110430265
bdi-r.1
for
100840216


Ortholog ID: 1920
Species nta nta nta sly sly sly sot sot ath ath ath gma gma gma bra bra bra vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna cit cit osa zma zma tae tae tae hvu sbi bdi
Symbol LOC142179357 LOC107776835 LOC107813435 GID1b-2 GID1b-1 GID1ac LOC102604924 LOC102579350 GID1A GID1B GID1C GID1C2 LOC100815161 LOC106797394 LOC103830382 LOC103870853 LOC103842107 LOC100249385 LOC18098845 LOC7457976 LOC7473315 LOC11405609 LOC11437344 LOC11416837 LOC107893263 LOC107893264 LOC107943945 LOC106375236 LOC106453025 LOC106453059 LOC102619373 LOC102618248 LOC4338764 LOC100216730 LOC103630348 LOC123181987 LOC123055338 LOC123132455 LOC123441390 LOC110430265 LOC100840216
Function* gibberellin receptor GID1B-like gibberellin receptor GID1C gibberellin receptor GID1C-like gibberellin receptor GID1b-2 gibberellin receptor GID1b-1 gibberellin receptor GID1ac gibberellin receptor GID1B-like gibberellin receptor GID1B-like alpha/beta-Hydrolases superfamily protein alpha/beta-Hydrolases superfamily protein alpha/beta-Hydrolases superfamily protein gibberellin receptor GID1C gibberellin receptor GID1C gibberellin receptor GID1B gibberellin receptor GID1B gibberellin receptor GID1A gibberellin receptor GID1B gibberellin receptor GID1B gibberellin receptor GID1C gibberellin receptor GID1B gibberellin receptor GID1C gibberellin receptor GID1C gibberellin receptor GID1B gibberellin receptor GID1B gibberellin receptor GID1C-like gibberellin receptor GID1C gibberellin receptor GID1B gibberellin receptor GID1B gibberellin receptor GID1A gibberellin receptor GID1A gibberellin receptor GID1C gibberellin receptor GID1B gibberellin receptor GID1-like Gibberellin receptor GID1A gibberellin receptor GID1-like gibberellin receptor GID1 gibberellin receptor GID1 gibberellin receptor GID1 gibberellin receptor GID1-like gibberellin receptor GID1-like gibberellin receptor GID1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 7
sly04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 3
sly04075 Plant hormone signal transduction 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra04075 Plant hormone signal transduction 3
bra00350 Tyrosine metabolism 2
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa03040 Spliceosome 3
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 5
tae04144 Endocytosis 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 5
tae04144 Endocytosis 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 10
tae04016 MAPK signaling pathway - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142179357 107776835 107813435 101253192 100736493 101253625 102604924 102579350 819674 825476 832790 100775474 100815161 106797394 103830382 103870853 103842107 100249385 18098845 7457976 7473315 11405609 11437344 11416837 107893263 107893264 107943945 106375236 106453025 106453059 102619373 102618248 4338764 100216730 103630348 123181987 123055338 123132455 123441390 110430265 100840216
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