ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18095229	uncharacterized LOC18095229
ppo-r.4	18095229	uncharacterized LOC18095229
ppo-u.5	18107071	uncharacterized LOC18107071
gma-u.5	100305502	small EDRK-rich factor 2
gma-u.5	100818846	putative SERF-like protein
mtr-u.5	25498307	small EDRK-rich factor 2
ath-u.5	AT3G24100	Uncharacterized protein family SERF
ath-u.5	AT4G13615	Uncharacterized protein family SERF
bra-r.6	103863618	small EDRK-rich factor 2
bra-r.6	103833349	uncharacterized LOC103833349
bra-r.6	103831942	small EDRK-rich factor 2
vvi-u.5	100262707	uncharacterized LOC100262707
ghi-r.1	121231843	small EDRK-rich factor 2
ghi-r.1	107955246	small EDRK-rich factor 2
ghi-r.1	107954908	uncharacterized LOC107954908
bna-r.1	106427004	small EDRK-rich factor 2
bna-r.1	106451496	uncharacterized LOC106451496
bna-r.1	106388408	small EDRK-rich factor 2
cit-r.1	102614321	uncharacterized LOC102614321
sly-u.5	101265069	uncharacterized LOC101265069
sly-u.5	109120544	uncharacterized LOC109120544
sot-r.1	102603841	small EDRK-rich factor 2
zma-u.5	100275405	uncharacterized LOC100275405
zma-u.5	100284167	uncharacterized LOC100284167
tae-r.2	123183296	uncharacterized LOC123183296
tae-r.2	123169817	small EDRK-rich factor 2
tae-r.2	123148779	uncharacterized LOC123148779
hvu-r.1	123412516	small EDRK-rich factor 2-like
sbi-r.1	8066581	putative SERF-like protein
sbi-r.1	8076943	small EDRK-rich factor 2
bdi-r.1	104582660	small EDRK-rich factor 2
cre-r.1	CHLRE_06g278238v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006369804.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto 1, mito 1, extr 1

(predict for XP_006369804.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_006369804.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18095229	ppo-r.4 for 18095229	ppo-u.5 for 18107071	gma-u.5 for 100305502	gma-u.5 for 100818846	mtr-u.5 for 25498307	ath-u.5 for AT3G24100	ath-u.5 for AT4G13615	bra-r.6 for 103863618	bra-r.6 for 103833349	bra-r.6 for 103831942	vvi-u.5 for 100262707	ghi-r.1 for 121231843	ghi-r.1 for 107955246	ghi-r.1 for 107954908	bna-r.1 for 106427004	bna-r.1 for 106451496	bna-r.1 for 106388408	cit-r.1 for 102614321	sly-u.5 for 101265069	sly-u.5 for 109120544	sot-r.1 for 102603841	zma-u.5 for 100275405	zma-u.5 for 100284167	tae-r.2 for 123183296	tae-r.2 for 123169817	tae-r.2 for 123148779	hvu-r.1 for 123412516	sbi-r.1 for 8066581	sbi-r.1 for 8076943	bdi-r.1 for 104582660	cre-r.1 for CHLRE_06g278238v5

Ortholog

Ortholog ID: 6272

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC18095229

uncharacterized LOC18107071

small EDRK-rich factor 2

putative SERF-like protein

small EDRK-rich factor 2

Uncharacterized protein family SERF

small EDRK-rich factor 2

uncharacterized LOC103833349

small EDRK-rich factor 2

uncharacterized LOC100262707

small EDRK-rich factor 2

uncharacterized LOC107954908

small EDRK-rich factor 2

uncharacterized LOC106451496

small EDRK-rich factor 2

uncharacterized LOC102614321

uncharacterized LOC101265069

uncharacterized LOC109120544

small EDRK-rich factor 2

uncharacterized LOC100275405

uncharacterized LOC100284167

uncharacterized LOC123183296

small EDRK-rich factor 2

uncharacterized LOC123069925

small EDRK-rich factor 2-like

putative SERF-like protein

small EDRK-rich factor 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	6
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	12
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	3
mtr03020	RNA polymerase	2
mtr03420	Nucleotide excision repair	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath00190	Oxidative phosphorylation	3
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	6
bra04145	Phagosome	3
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	11
vvi03040	Spliceosome	3
vvi04144	Endocytosis	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00190	Oxidative phosphorylation	4
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	6
sly03040	Spliceosome	3
sly04144	Endocytosis	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot04141	Protein processing in endoplasmic reticulum	3
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	6
zma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	7
hvu03040	Spliceosome	3
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	7
bdi03040	Spliceosome	4
bdi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00520	Amino sugar and nucleotide sugar metabolism	5
cre01250	Biosynthesis of nucleotide sugars	5
cre01240	Biosynthesis of cofactors	3
cre00040	Pentose and glucuronate interconversions	2
cre00053	Ascorbate and aldarate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

18095229

18107071

100305502

100818846

25498307

821996

826995

103863618

103833349

103831942

100262707

121231843

107955246

107954908

106427004

106451496

106434066

102614321

101265069

109120544

102603841

100275405

100284167

123183296

123169817

123069925

123412516

8066581

8076943

104582660

5723542

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18095229 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18095229 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	zma	tae	hvu	sbi	bdi	cre	osa	nta
Paralog	3	2	1	2	3	1	3	3	1	2	1	2	3	1	2	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18095229 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18095229 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**