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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18095472   anaphase-promoting complex subunit 6 
 ppo-r.4   18095472   anaphase-promoting complex subunit 6 
 ppo-u.5   7489047   anaphase-promoting complex subunit 6 
 gma-u.5   100818974   anaphase-promoting complex subunit 6 
 gma-u.5   100817356   anaphase-promoting complex subunit 6 
 mtr-u.5   11405324   anaphase-promoting complex subunit 6 
 ath-u.5   APC6   anaphase promoting complex 6 
 vvi-u.5   100267422   anaphase-promoting complex subunit 6 
 sly-u.5   101261990   anaphase-promoting complex subunit 6 
 osa-u.5   9267792   anaphase-promoting complex subunit 6 
 zma-u.5   100273613   putative tetratricopeptide repeat domain containing family protein 
 zma-u.5   103639381   anaphase-promoting complex subunit 6 

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Top 50 coexpressed genes to 18095472 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18095472 (ppo-u.5 coexpression data)

CoexMap"18095472"


ppoLOC18095472 | Entrez gene ID : 18095472    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop04120 [list] [network] Ubiquitin mediated proteolysis (184 genes)
GO BP
GO:0051301 [list] [network] cell division  (74 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024447550.1 [sequence] [blastp]
XP_052301416.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_024447550.1)
cyto 6,  nucl 1,  mito 1,  vacu 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  cysk_nucl 1,  nucl_plas 1,  mito_plas 1  (predict for XP_052301416.1)
Subcellular
localization
TargetP
other 8  (predict for XP_024447550.1)
other 8  (predict for XP_052301416.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18095472

.
ppo-r.4
for
18095472

.
ppo-u.5
for
7489047

.
gma-u.5
for
100818974

.
gma-u.5
for
100817356

.
mtr-u.5
for
11405324

.
ath-u.5
for
APC6

.
vvi-u.5
for
100267422

.
sly-u.5
for
101261990

.
osa-u.5
for
9267792

.
zma-u.5
for
100273613

.
zma-u.5
for
103639381

.


Ortholog ID: 7860
Species ath gma gma sly osa zma zma vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol APC6 LOC100818974 LOC100817356 LOC101261990 LOC9267792 LOC103639381 LOC100273613 LOC100267422 LOC7489047 LOC18095472 LOC11405324 LOC123098128 LOC123092842 LOC123449209 LOC121213780 LOC107917781 LOC106390060 LOC106358626 CHLRE_13g562950v5 LOC8078876 LOC102601313 LOC102612573 LOC100827551 LOC107790682 LOC107777012
Function* anaphase promoting complex 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 putative tetratricopeptide repeat domain containing family protein anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6-like uncharacterized protein anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6-like anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6 anaphase-promoting complex subunit 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03430 Mismatch repair 4
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 4
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly03030 DNA replication 2
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 7
vvi03030 DNA replication 6
vvi03420 Nucleotide excision repair 6
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03013 Nucleocytoplasmic transport 3
tae03250 Viral life cycle - HIV-1 3
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03013 Nucleocytoplasmic transport 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna03013 Nucleocytoplasmic transport 4
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 3
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 3
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844213 100818974 100817356 101261990 9267792 103639381 100273613 100267422 7489047 18095472 11405324 123098128 123092842 123449209 121213780 107917781 106390060 106358626 5718979 8078876 102601313 102612573 100827551 107790682 107777012
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