ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18096230	uncharacterized LOC18096230
ppo-r.4	18096230	uncharacterized LOC18096230
ppo-u.5	7468902	uncharacterized LOC7468902
gma-u.5	100787579	uncharacterized LOC100787579
gma-u.5	100814916	uncharacterized LOC100814916
mtr-u.5	25489432	protein phosphatase 1 regulatory subunit 15A
ath-u.5	AT1G22230	nucleolar GTP-binding protein
ath-u.5	AT1G78110	nucleolar GTP-binding protein
bra-r.6	103829342	uncharacterized LOC103829342
bra-r.6	103830538	ABC transporter F family member 4
bra-r.6	103832237	uncharacterized LOC103832237
vvi-u.5	100264413	uncharacterized LOC100264413
ghi-r.1	107962446	uncharacterized LOC107962446
ghi-r.1	107957740	myotubularin-related protein DDB_G0290005
ghi-r.1	107905126	uncharacterized LOC107905126
bna-r.1	106413758	uncharacterized LOC106413758
bna-r.1	106356923	uncharacterized LOC106356923
cit-r.1	102612852	uncharacterized LOC102612852
sly-u.5	101250397	uncharacterized LOC101250397
sly-u.5	101249802	uncharacterized LOC101249802
sot-r.1	102585002	uncharacterized LOC102585002
sot-r.1	102600834	kinesin-related protein 4-like
nta-r.1	107762052	uncharacterized LOC107762052
nta-r.1	107780753	uncharacterized LOC107780753
nta-r.1	107770549	uncharacterized LOC107770549
osa-u.5	4330756	uncharacterized LOC4330756
osa-u.5	4346888	uncharacterized LOC4346888
zma-u.5	103654249	uncharacterized LOC103654249
zma-u.5	100216650	uncharacterized LOC100216650
tae-r.2	123124734	uncharacterized LOC123124734
hvu-r.1	123396371	uncharacterized LOC123396371
hvu-r.1	123402474	uncharacterized LOC123402474
sbi-r.1	8075694	uncharacterized LOC8075694
bdi-r.1	100824193	uncharacterized LOC100824193

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003677 [list] [network] DNA binding

(2205 genes)

IEA

Protein

XP_024450101.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_024450101.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_024450101.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18096230	ppo-r.4 for 18096230	ppo-u.5 for 7468902	gma-u.5 for 100787579	gma-u.5 for 100814916	mtr-u.5 for 25489432	ath-u.5 for AT1G22230	ath-u.5 for AT1G78110	bra-r.6 for 103829342	bra-r.6 for 103830538	bra-r.6 for 103832237	vvi-u.5 for 100264413	ghi-r.1 for 107962446	ghi-r.1 for 107957740	ghi-r.1 for 107905126	bna-r.1 for 106413758	bna-r.1 for 106356923	cit-r.1 for 102612852	sly-u.5 for 101250397	sly-u.5 for 101249802	sot-r.1 for 102585002	sot-r.1 for 102600834	nta-r.1 for 107762052	nta-r.1 for 107780753	nta-r.1 for 107770549	osa-u.5 for 4330756	osa-u.5 for 4346888	zma-u.5 for 103654249	zma-u.5 for 100216650	tae-r.2 for 123124734	hvu-r.1 for 123396371	hvu-r.1 for 123402474	sbi-r.1 for 8075694	bdi-r.1 for 100824193

Ortholog

Ortholog ID: 3166

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC18096230

uncharacterized LOC7468902

uncharacterized LOC100787579

uncharacterized LOC100814916

protein phosphatase 1 regulatory subunit 15A

nucleolar GTP-binding protein

uncharacterized LOC103829342

ABC transporter F family member 4

uncharacterized LOC103853111

uncharacterized LOC100264413

uncharacterized LOC107962446

uncharacterized LOC107905126

uncharacterized LOC107901450

uncharacterized LOC125603880

uncharacterized LOC106454785

uncharacterized LOC106423847

uncharacterized LOC102612852

uncharacterized LOC101250397

uncharacterized LOC101249802

uncharacterized LOC102585002

kinesin-related protein 4-like

uncharacterized LOC107762052

uncharacterized LOC107780753

uncharacterized LOC107769521

uncharacterized LOC4330756

uncharacterized LOC4346888

uncharacterized LOC103654249

uncharacterized LOC100216650

uncharacterized LOC123130956

uncharacterized LOC123134513

uncharacterized LOC123396371

uncharacterized LOC123402474

uncharacterized LOC8075694

uncharacterized LOC100824193

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	4
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00380	Tryptophan metabolism	5
bna04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu04145	Phagosome	2
hvu04517	IgSF CAM signaling	2
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

18096230

7468902

100787579

100814916

25489432

838828

844147

103829342

103830538

103853111

100264413

107962446

107905126

107901450

125603880

106454785

106423847

102612852

101250397

101249802

102585002

102600834

107762052

107780753

107769521

4330756

4346888

103654249

100216650

123130956

123134513

123396371

123402474

8075694

100824193

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18096230 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18096230 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	2	3	1	3	2	1	2	2	3	2	2	1	2	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18096230 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18096230 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**