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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18096958   ferredoxin C 2, chloroplastic 
 ppo-r.4   18096958   ferredoxin C 2, chloroplastic 
 gma-u.5   100791128   ferredoxin C 2, chloroplastic 
 gma-u.5   100782906   ferredoxin C 2, chloroplastic 
 mtr-u.5   11413430   ferredoxin C 2, chloroplastic 
 ath-u.5   FdC2   2Fe-2S ferredoxin-like superfamily protein 
 vvi-u.5   100242061   ferredoxin C 2, chloroplastic 
 sly-u.5   101266059   ferredoxin C 2, chloroplastic 
 osa-u.5   4333746   ferredoxin C 2, chloroplastic 
 zma-u.5   103625981   ferredoxin C 2, chloroplastic 

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Top 50 coexpressed genes to 18096958 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18096958 (ppo-u.5 coexpression data)

CoexMap"18096958"


ppoLOC18096958 | Entrez gene ID : 18096958    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00195 [list] [network] Photosynthesis (104 genes)
GO BP
GO CC
GO MF
GO:0051536 [list] [network] iron-sulfur cluster binding  (109 genes)  IEA  
Protein XP_024452426.1 [sequence] [blastp]
XP_024452427.1 [sequence] [blastp]
XP_024452428.1 [sequence] [blastp]
XP_024452429.1 [sequence] [blastp]
XP_052307737.1 [sequence] [blastp]
XP_052307738.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024452426.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024452427.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024452428.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_024452429.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_052307737.1)
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_052307738.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024452426.1)
chlo 9  (predict for XP_024452427.1)
chlo 9  (predict for XP_024452428.1)
chlo 9  (predict for XP_024452429.1)
chlo 9  (predict for XP_052307737.1)
chlo 9  (predict for XP_052307738.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18096958

.
ppo-r.4
for
18096958

.
gma-u.5
for
100791128

.
gma-u.5
for
100782906

.
mtr-u.5
for
11413430

.
ath-u.5
for
FdC2

.
vvi-u.5
for
100242061

.
sly-u.5
for
101266059

.
osa-u.5
for
4333746

.
zma-u.5
for
103625981

.


Ortholog ID: 8270
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot cit bdi nta nta
Symbol FdC2 LOC100782906 LOC100791128 LOC101266059 LOC4333746 LOC103625981 LOC103833653 LOC103840153 LOC100242061 LOC18096958 LOC11413430 LOC123090692 LOC123087269 LOC123447157 LOC121211097 LOC107946741 LOC106418727 CHLRE_03g183850v5 LOC8054162 LOC102594244 LOC102618936 LOC100843226 LOC107810328 LOC107771821
Function* 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic ferredoxin C 2, chloroplastic-like uncharacterized protein ferredoxin-1 ferredoxin-2 ferredoxin C 2, chloroplastic ferredoxin, chloroplastic ferredoxin C 2, chloroplastic-like ferredoxin C 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00630 Glyoxylate and dicarboxylate metabolism 5
hvu00710 Carbon fixation by Calvin cycle 4
hvu00260 Glycine, serine and threonine metabolism 4
hvu00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi03060 Protein export 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi03060 Protein export 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00860 Porphyrin metabolism 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00860 Porphyrin metabolism 2
nta00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840149 100782906 100791128 101266059 4333746 103625981 103833653 103840153 100242061 18096958 11413430 123090692 123087269 123447157 121211097 107946741 106418727 5728500 8054162 102594244 102618936 100843226 107810328 107771821
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