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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18097310   RCC1 domain-containing protein RUG3, mitochondrial 
 ppo-r.4   18097310   RCC1 domain-containing protein RUG3, mitochondrial 
 gma-u.5   100808855   RCC1 domain-containing protein RUG3, mitochondrial 
 mtr-u.5   25498137   RCC1 domain-containing protein RUG3, mitochondrial 
 ath-u.5   RUG3   Regulator of chromosome condensation (RCC1) family protein 
 vvi-u.5   100260362   RCC1 domain-containing protein RUG3, mitochondrial 
 sly-u.5   101261136   RCC1 domain-containing protein RUG3, mitochondrial 
 osa-u.5   9267369   RCC1 domain-containing protein RUG3, mitochondrial 
 zma-u.5   100277821   uncharacterized LOC100277821 

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Top 50 coexpressed genes to 18097310 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18097310 (ppo-u.5 coexpression data)

CoexMap"18097310"


ppoLOC18097310 | Entrez gene ID : 18097310    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006383819.3 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 4,  cyto_mito 4,  chlo 1  (predict for XP_006383819.3)
Subcellular
localization
TargetP
mito 9  (predict for XP_006383819.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18097310

.
ppo-r.4
for
18097310

.
gma-u.5
for
100808855

.
mtr-u.5
for
25498137

.
ath-u.5
for
RUG3

.
vvi-u.5
for
100260362

.
sly-u.5
for
101261136

.
osa-u.5
for
9267369

.
zma-u.5
for
100277821

.


Ortholog ID: 11454
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol RUG3 LOC100808855 LOC101261136 LOC9267369 LOC100277821 LOC103860545 LOC100260362 LOC18097310 LOC25498137 LOC123104826 LOC123113108 LOC123452004 LOC107950237 LOC107915432 LOC106434607 LOC106377264 LOC8077264 LOC102604869 LOC102615384 LOC100843915 LOC107770388 LOC107760336
Function* Regulator of chromosome condensation (RCC1) family protein RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial uncharacterized LOC100277821 RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial RCC1 domain-containing protein RUG3, mitochondrial ultraviolet-B receptor UVR8 E3 ubiquitin-protein ligase HERC2 RCC1 domain-containing protein RUG3, mitochondrial ultraviolet-B receptor UVR8 RCC1 domain-containing protein RUG3, mitochondrial-like RCC1 domain-containing protein RUG3, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 7
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04122 Sulfur relay system 3
tae03460 Fanconi anemia pathway 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 2
sot00770 Pantothenate and CoA biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836208 100808855 101261136 9267369 100277821 103860545 100260362 18097310 25498137 123104826 123113108 123452004 107950237 107915432 106434607 106377264 8077264 102604869 102615384 100843915 107770388 107760336
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