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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098255   50S ribosomal protein L9, chloroplastic 
 ppo-r.4   18098255   50S ribosomal protein L9, chloroplastic 
 gma-u.5   100500390   50S ribosomal protein L9, chloroplastic 
 gma-u.5   100500279   uncharacterized LOC100500279 
 mtr-u.5   11405919   50S ribosomal protein L9, chloroplastic 
 ath-u.5   RPL9   ribosomal protein L9 
 vvi-u.5   100251697   large ribosomal subunit protein bL9c 
 sly-u.5   101262888   large ribosomal subunit protein bL9c 
 osa-u.5   4331189   large ribosomal subunit protein bL9c 
 zma-u.5   100285012   50S ribosomal protein L9 

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Top 50 coexpressed genes to 18098255 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098255 (ppo-u.5 coexpression data)

CoexMap"18098255"


ppoLOC18098255 | Entrez gene ID : 18098255    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_006384967.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  cysk_nucl 1  (predict for XP_006384967.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_006384967.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098255

.
ppo-r.4
for
18098255

.
gma-u.5
for
100500390

.
gma-u.5
for
100500279

.
mtr-u.5
for
11405919

.
ath-u.5
for
RPL9

.
vvi-u.5
for
100251697

.
sly-u.5
for
101262888

.
osa-u.5
for
4331189

.
zma-u.5
for
100285012

.


Ortholog ID: 10129
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol RPL9 LOC100500279 LOC100500390 LOC101262888 LOC4331189 LOC100285012 LOC103873073 LOC100251697 LOC18098255 LOC11405919 LOC123129097 LOC123146264 LOC123401651 LOC107906638 LOC121229293 LOC111214963 LOC106428563 CHLRE_12g556050v5 LOC8056405 LOC102606429 LOC102626054 LOC100845905 LOC107817294 LOC107799768
Function* ribosomal protein L9 uncharacterized LOC100500279 50S ribosomal protein L9, chloroplastic large ribosomal subunit protein bL9c large ribosomal subunit protein bL9c 50S ribosomal protein L9 50S ribosomal protein L9, chloroplastic large ribosomal subunit protein bL9c 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic-like 50S ribosomal protein L9, chloroplastic-like 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic-like 50S ribosomal protein L9, chloroplastic uncharacterized protein 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic 50S ribosomal protein L9, chloroplastic large ribosomal subunit protein bL9c-like large ribosomal subunit protein bL9c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
sly00860 Porphyrin metabolism 3
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 13
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03060 Protein export 3
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823623 100500279 100500390 101262888 4331189 100285012 103873073 100251697 18098255 11405919 123129097 123146264 123401651 107906638 121229293 111214963 106428563 5719747 8056405 102606429 102626054 100845905 107817294 107799768
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