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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098316   transcription factor GTE11 
 ppo-r.4   18098316   transcription factor GTE11 
 gma-u.5   100813884   bromodomain-containing protein 4B 
 gma-u.5   100802058   bromodomain testis-specific protein 
 mtr-u.5   11430331   bromodomain-containing protein C631.02 
 ath-u.5   AT1G58025   DNA-binding bromodomain-containing protein 
 vvi-u.5   100254331   bromodomain-containing factor 1 
 sly-u.5   101268321   bromodomain-containing factor 1 
 osa-u.5   4344472   bromodomain-containing factor 2 
 zma-u.5   100192704   DNA-binding bromodomain-containing protein 

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Top 50 coexpressed genes to 18098316 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098316 (ppo-u.5 coexpression data)

CoexMap"18098316"


ppoLOC18098316 | Entrez gene ID : 18098316    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006385032.2 [sequence] [blastp]
XP_024455571.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for XP_006385032.2)
nucl 7,  chlo 2  (predict for XP_024455571.2)
Subcellular
localization
TargetP
other 5  (predict for XP_006385032.2)
other 5  (predict for XP_024455571.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098316

.
ppo-r.4
for
18098316

.
gma-u.5
for
100813884

.
gma-u.5
for
100802058

.
mtr-u.5
for
11430331

.
ath-u.5
for
AT1G58025

.
vvi-u.5
for
100254331

.
sly-u.5
for
101268321

.
osa-u.5
for
4344472

.
zma-u.5
for
100192704

.


Ortholog ID: 11097
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G58025 LOC100802058 LOC100813884 LOC101268321 LOC4344472 LOC100192704 LOC103828710 LOC100254331 LOC18098316 LOC11430331 LOC123157504 LOC123147614 LOC123407226 LOC107922455 LOC107925467 LOC106360681 LOC106376643 LOC8064361 LOC102591674 LOC102607030 LOC100831261 LOC107792917 LOC107770773
Function* DNA-binding bromodomain-containing protein bromodomain testis-specific protein bromodomain-containing protein 4B bromodomain-containing factor 1 bromodomain-containing factor 2 DNA-binding bromodomain-containing protein bromodomain-containing protein 4 bromodomain-containing factor 1 transcription factor GTE11 bromodomain-containing protein C631.02 bromodomain-containing protein 3 bromodomain-containing protein 4 ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 bromodomain testis-specific protein bromodomain testis-specific protein bromodomain-containing protein 4-like bromodomain-containing protein 2 bromodomain-containing factor 1 bromodomain-containing factor 2 uncharacterized LOC102607030 bromodomain-containing protein 3 uncharacterized LOC107792917 uncharacterized LOC107770773
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03420 Nucleotide excision repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842169 100802058 100813884 101268321 4344472 100192704 103828710 100254331 18098316 11430331 123157504 123147614 123407226 107922455 107925467 106360681 106376643 8064361 102591674 102607030 100831261 107792917 107770773
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