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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098433   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 ppo-r.4   18098433   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 gma-u.5   100788280   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 gma-u.5   100500135   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 mtr-u.5   11439239   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 ath-u.5   AT4G19190   zinc knuckle (CCHC-type) family protein 
 vvi-u.5   100242608   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 sly-u.5   101252617   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 osa-u.5   4342025   uncharacterized zinc finger CCHC domain-containing protein At4g19190 
 zma-u.5   103626428   zinc knuckle (CCHC-type) family protein 

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Top 50 coexpressed genes to 18098433 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098433 (ppo-u.5 coexpression data)

CoexMap"18098433"


ppoLOC18098433 | Entrez gene ID : 18098433    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (78 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0003714 [list] [network] transcription corepressor activity  (36 genes)  IEA  
Protein XP_006385163.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006385163.2)
Subcellular
localization
TargetP
other 9  (predict for XP_006385163.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098433

.
ppo-r.4
for
18098433

.
gma-u.5
for
100788280

.
gma-u.5
for
100500135

.
mtr-u.5
for
11439239

.
ath-u.5
for
AT4G19190

.
vvi-u.5
for
100242608

.
sly-u.5
for
101252617

.
osa-u.5
for
4342025

.
zma-u.5
for
103626428

.


Ortholog ID: 10868
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G19190 LOC100788280 LOC100500135 LOC101252617 LOC4342025 LOC103626428 LOC103857198 LOC100242608 LOC18098433 LOC11439239 LOC123163665 LOC123156074 LOC107900685 LOC107929455 LOC106433582 BNAC01G11600D CHLRE_06g280700v5 LOC8065601 LOC102579482 LOC102616028 LOC100833449 LOC107810819 LOC107792268
Function* zinc knuckle (CCHC-type) family protein uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 zinc knuckle (CCHC-type) family protein uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized protein uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 uncharacterized zinc finger CCHC domain-containing protein At4g19190 putative zinc finger CCHC domain-containing protein At4g19190 putative zinc finger CCHC domain-containing protein At4g19190
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03013 Nucleocytoplasmic transport 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827658 100788280 100500135 101252617 4342025 103626428 103857198 100242608 18098433 11439239 123163665 123156074 107900685 107929455 106433582 106377072 5720916 8065601 102579482 102616028 100833449 107810819 107792268
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