ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18098613	uncharacterized LOC18098613
ppo-r.4	18098613	uncharacterized LOC18098613
gma-u.5	100797818	uncharacterized LOC100797818
gma-u.5	100788595	uncharacterized LOC100788595
mtr-u.5	112421350	uncharacterized LOC112421350
ath-u.5	AT1G56310	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
bra-r.6	103838695	uncharacterized LOC103838695
vvi-u.5	100254615	uncharacterized LOC100254615
ghi-r.1	107893620	uncharacterized LOC107893620
ghi-r.1	107920830	exonuclease mut-7 homolog
bna-r.1	111213414	uncharacterized LOC111213414
bna-r.1	BNAA09G15460D	uncharacterized BNAA09G15460D
cit-r.1	102615303	uncharacterized LOC102615303
sly-u.5	101268229	uncharacterized LOC101268229
sot-r.1	102598801	uncharacterized LOC102598801
nta-r.1	107825729	uncharacterized LOC107825729
nta-r.1	107761499	uncharacterized LOC107761499
osa-u.5	4338523	uncharacterized LOC4338523
zma-u.5	100382828	uncharacterized LOC100382828
tae-r.2	123052909	uncharacterized LOC123052909
tae-r.2	123129284	uncharacterized LOC123129284
tae-r.2	123181744	uncharacterized LOC123181744
hvu-r.1	123440851	uncharacterized LOC123440851
sbi-r.1	8083765	exonuclease mut-7 homolog
bdi-r.1	100837681	exonuclease mut-7 homolog
cre-r.1	CHLRE_10g445150v5	uncharacterized protein
cre-r.1	CHLRE_02g083900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006139 [list] [network] nucleobase-containing compound metabolic process

(2262 genes)

IEA

GO CC

GO MF

GO:0008408 [list] [network] 3'-5' exonuclease activity	(72 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(4002 genes)	IEA

Protein

XP_006382420.2 [sequence] [blastp]
XP_024456530.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, vacu 1, E.R. 1, cysk_nucl 1, E.R._vacu 1	(predict for XP_006382420.2)
cyto 4, nucl 3, vacu 1, E.R. 1, cysk_nucl 1, E.R._vacu 1	(predict for XP_024456530.2)

Subcellular
localization
TargetP

other 9	(predict for XP_006382420.2)
other 9	(predict for XP_024456530.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18098613	ppo-r.4 for 18098613	gma-u.5 for 100797818	gma-u.5 for 100788595	mtr-u.5 for 112421350	ath-u.5 for AT1G56310	bra-r.6 for 103838695	vvi-u.5 for 100254615	ghi-r.1 for 107893620	ghi-r.1 for 107920830	bna-r.1 for 111213414	bna-r.1 for BNAA09G15460D	cit-r.1 for 102615303	sly-u.5 for 101268229	sot-r.1 for 102598801	nta-r.1 for 107825729	nta-r.1 for 107761499	osa-u.5 for 4338523	zma-u.5 for 100382828	tae-r.2 for 123052909	tae-r.2 for 123129284	tae-r.2 for 123181744	hvu-r.1 for 123440851	sbi-r.1 for 8083765	bdi-r.1 for 100837681	cre-r.1 for CHLRE_10g445150v5	cre-r.1 for CHLRE_02g083900v5

Ortholog

Ortholog ID: 9852

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC18098613

uncharacterized LOC100797818

uncharacterized LOC100788595

uncharacterized LOC112421350

Polynucleotidyl transferase, ribonuclease H-like superfamily protein

uncharacterized LOC103838695

uncharacterized LOC100254615

uncharacterized LOC107893620

exonuclease mut-7 homolog

uncharacterized LOC111213414

uncharacterized BNAA09G15460D

uncharacterized LOC102615303

uncharacterized LOC101268229

uncharacterized LOC102598801

uncharacterized LOC107825729

uncharacterized LOC107761499

uncharacterized LOC4338523

uncharacterized LOC100382828

uncharacterized LOC123052909

uncharacterized LOC123129284

uncharacterized LOC123181744

uncharacterized LOC123440851

exonuclease mut-7 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr00740	Riboflavin metabolism	2
mtr00790	Folate biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	5
bna00620	Pyruvate metabolism	5
bna01200	Carbon metabolism	5
bna01230	Biosynthesis of amino acids	4
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	5
bna00780	Biotin metabolism	2
bna04517	IgSF CAM signaling	2
bna04814	Motor proteins	2
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00280	Valine, leucine and isoleucine degradation	4
sly00330	Arginine and proline metabolism	3
sly00310	Lysine degradation	2
sly00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03430	Mismatch repair	3
osa03440	Homologous recombination	2
osa03030	DNA replication	2
osa03410	Base excision repair	2
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	6
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3
tae03430	Mismatch repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	4
tae03083	Polycomb repressive complex	4
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	6
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3
tae03430	Mismatch repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	3
bdi03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

18098613

100797818

100788595

112421350

842084

103838695

100254615

107893620

107920830

111213414

106386616

102615303

101268229

102598801

107825729

107761499

4338523

100382828

123052909

123129284

123181744

123440851

8083765

100837681

5716078

5727352

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18098613 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18098613 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	2	1	1	1	1	2	2	1	1	1	2	1	1	3	1	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18098613 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18098613 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**