ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100806062	uncharacterized LOC100806062
gma-u.5	100818931	uncharacterized LOC100818931
mtr-u.5	25490920	uncharacterized LOC25490920
ath-u.5	AT5G58610	PHD finger transcription factor
bra-r.6	103845294	increased DNA methylation 1
ghi-r.1	107954185	uncharacterized LOC107954185
bna-r.1	106445866	increased DNA methylation 1
cit-r.1	102623682	uncharacterized LOC102623682
sly-u.5	101245266	uncharacterized LOC101245266
sly-u.5	101267496	increased DNA methylation 1-like
sly-u.5	101264968	uncharacterized LOC101264968
sot-r.1	102602469	uncharacterized LOC102602469
sot-r.1	102581044	uncharacterized LOC102581044
nta-r.1	107829855	uncharacterized LOC107829855
nta-r.1	107795320	uncharacterized LOC107795320
nta-r.1	107797638	uncharacterized LOC107797638
zma-u.5	100384354	uncharacterized LOC100384354
tae-r.2	123085575	uncharacterized LOC123085575
tae-r.2	123097780	uncharacterized LOC123097780
hvu-r.1	123448914	uncharacterized LOC123448914
sbi-r.1	8081435	uncharacterized LOC8081435
cre-r.1	CHLRE_06g296950v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0045892 [list] [network] negative regulation of DNA-templated transcription

(78 genes)

IEA

GO CC

GO MF

GO:0003714 [list] [network] transcription corepressor activity	(36 genes)	IEA
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups	(379 genes)	IEA

Protein

XP_052311785.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_052311785.1)

Subcellular
localization
TargetP

other 7

(predict for XP_052311785.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100806062	gma-u.5 for 100818931	mtr-u.5 for 25490920	ath-u.5 for AT5G58610	bra-r.6 for 103845294	ghi-r.1 for 107954185	bna-r.1 for 106445866	cit-r.1 for 102623682	sly-u.5 for 101245266	sly-u.5 for 101267496	sly-u.5 for 101264968	sot-r.1 for 102602469	sot-r.1 for 102581044	nta-r.1 for 107829855	nta-r.1 for 107795320	nta-r.1 for 107797638	zma-u.5 for 100384354	tae-r.2 for 123085575	tae-r.2 for 123097780	hvu-r.1 for 123448914	sbi-r.1 for 8081435	cre-r.1 for CHLRE_06g296950v5

Ortholog

Ortholog ID: 3272

Species

gma

mtr

ath

bra

ghi

bna

cit

sly

sot

nta

zma

tae

hvu

sbi

cre

Symbol

Function^*

uncharacterized LOC100806062

uncharacterized LOC102661511

uncharacterized LOC100814680

uncharacterized LOC11429698

increased DNA methylation 1

PHD finger transcription factor

increased DNA methylation 1

uncharacterized LOC107954185

uncharacterized LOC107940881

increased DNA methylation 1

uncharacterized LOC102623682

uncharacterized LOC101245266

increased DNA methylation 1-like

uncharacterized LOC101264968

uncharacterized LOC102602469

uncharacterized LOC102581044

uncharacterized LOC107829855

uncharacterized LOC107795320

uncharacterized LOC107797638

uncharacterized LOC100384354

uncharacterized LOC123085575

uncharacterized LOC123097780

uncharacterized LOC123448914

uncharacterized LOC8081435

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2
bra03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00630	Glyoxylate and dicarboxylate metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03420	Nucleotide excision repair	2
nta04120	Ubiquitin mediated proteolysis	2
nta00250	Alanine, aspartate and glutamate metabolism	2
nta00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	2
sbi03083	Polycomb repressive complex	2
sbi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100806062

102661511

100814680

11429698

25489963

835975

103845294

107954185

107940881

106445866

102623682

101245266

101267496

101264968

102602469

102581044

107829855

107795320

107797638

100384354

123085575

123097780

123448914

8081435

5717043

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100806062 (gma-u.5 coexpression data)

Top 50 enrichment test to 100806062 (gma-u.5 coexpression data)


Species	gma	mtr	ath	bra	ghi	bna	cit	sly	sot	nta	zma	tae	hvu	sbi	cre	vvi	ppo	bdi	osa
Paralog	2	1	1	1	1	1	1	3	2	3	1	2	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100806062 (gma-u.5 coexpression data)

Top 50 enrichment test to 100806062 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**