ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18103075	uncharacterized LOC18103075
ppo-r.4	18103075	uncharacterized LOC18103075
ppo-u.5	18106812	uncharacterized LOC18106812
ppo-u.5	7470250	uncharacterized LOC7470250
gma-u.5	100776402	guanylate-binding protein 3
gma-u.5	100796442	guanylate-binding protein 1
gma-u.5	100808644	guanylate-binding protein 1
mtr-u.5	25493075	guanylate-binding protein 1
ath-u.5	AT5G46070	Guanylate-binding family protein
bra-r.6	103839631	guanylate-binding protein 2
bra-r.6	103827759	guanylate-binding protein 2
vvi-u.5	100257282	uncharacterized LOC100257282
ghi-r.1	107925146	guanylate-binding protein 3
ghi-r.1	107901894	guanylate-binding protein 7
ghi-r.1	107962253	guanylate-binding protein 1
bna-r.1	106436370	guanylate-binding protein 2
bna-r.1	106401259	guanylate-binding protein 2-like
bna-r.1	111209807	guanylate-binding protein 2-like
cit-r.1	102607199	uncharacterized LOC102607199
sly-u.5	101250056	uncharacterized LOC101250056
sly-u.5	101263779	uncharacterized LOC101263779
sot-r.1	102581173	guanylate-binding protein 7-like
sot-r.1	102585771	guanylate-binding protein 1
nta-r.1	107811166	uncharacterized LOC107811166
nta-r.1	107826318	uncharacterized LOC107826318
nta-r.1	107760512	uncharacterized LOC107760512
osa-u.5	4339613	uncharacterized LOC4339613
osa-u.5	4329117	uncharacterized LOC4329117
zma-u.5	103631635	guanylate-binding protein 1
zma-u.5	100193950	Guanylate-binding family protein
zma-u.5	100272243	Guanylate-binding family protein
tae-r.2	123145793	guanylate-binding protein 2
tae-r.2	123183089	guanylate-binding protein 4
tae-r.2	123068170	guanylate-binding protein 4
hvu-r.1	123450220	guanylate-binding protein 2
sbi-r.1	8081657	myosin-7
sbi-r.1	8063593	guanylate-binding protein 1
bdi-r.1	100834701	guanylate-binding protein 2
bdi-r.1	100830531	myosin-4
cre-r.1	CHLRE_11g467610v5	uncharacterized protein
cre-r.1	CHLRE_16g676200v5	uncharacterized protein
cre-r.1	CHLRE_08g384200v5	uncharacterized protein

Top 50 coexpressed genes to 18103075 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18103075 (ppo-u.5 coexpression data)

CoexMap"18103075"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003924 [list] [network] GTPase activity	(264 genes)	IEA
GO:0005525 [list] [network] GTP binding	(290 genes)	IEA

Protein

XP_024436836.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, nucl 1, mito 1, plas 1, cyto_nucl 1, cysk_nucl 1, mito_plas 1

(predict for XP_024436836.2)

Subcellular
localization
TargetP

chlo 5, mito 4

(predict for XP_024436836.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18103075	ppo-r.4 for 18103075	ppo-u.5 for 18106812	ppo-u.5 for 7470250	gma-u.5 for 100776402	gma-u.5 for 100796442	gma-u.5 for 100808644	mtr-u.5 for 25493075	ath-u.5 for AT5G46070	bra-r.6 for 103839631	bra-r.6 for 103827759	vvi-u.5 for 100257282	ghi-r.1 for 107925146	ghi-r.1 for 107901894	ghi-r.1 for 107962253	bna-r.1 for 106436370	bna-r.1 for 106401259	bna-r.1 for 111209807	cit-r.1 for 102607199	sly-u.5 for 101250056	sly-u.5 for 101263779	sot-r.1 for 102581173	sot-r.1 for 102585771	nta-r.1 for 107811166	nta-r.1 for 107826318	nta-r.1 for 107760512	osa-u.5 for 4339613	osa-u.5 for 4329117	zma-u.5 for 103631635	zma-u.5 for 100193950	zma-u.5 for 100272243	tae-r.2 for 123145793	tae-r.2 for 123183089	tae-r.2 for 123068170	hvu-r.1 for 123450220	sbi-r.1 for 8081657	sbi-r.1 for 8063593	bdi-r.1 for 100834701	bdi-r.1 for 100830531	cre-r.1 for CHLRE_11g467610v5	cre-r.1 for CHLRE_16g676200v5	cre-r.1 for CHLRE_08g384200v5

Ortholog

Ortholog ID: 3986

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC18103075

uncharacterized LOC18106812

uncharacterized LOC7470250

guanylate-binding protein 3

guanylate-binding protein 1

Guanylate-binding family protein

guanylate-binding protein 2

uncharacterized LOC100257282

guanylate-binding protein 3

guanylate-binding protein 7

guanylate-binding protein 1

guanylate-binding protein 2

guanylate-binding protein 2-like

guanylate-binding protein 2

uncharacterized LOC102607199

uncharacterized LOC101250056

uncharacterized LOC101263779

guanylate-binding protein 7-like

guanylate-binding protein 1

uncharacterized LOC107811166

uncharacterized LOC107826318

uncharacterized LOC107760512

uncharacterized LOC4339613

uncharacterized LOC4329117

guanylate-binding protein 1

Guanylate-binding family protein

guanylate-binding protein 2

guanylate-binding protein 4

guanylate-binding protein 2

myosin-7

guanylate-binding protein 1

guanylate-binding protein 2

myosin-4

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03013	Nucleocytoplasmic transport	2
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2
ghi03440	Homologous recombination	2
ghi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2
sly03420	Nucleotide excision repair	2
sly03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03250	Viral life cycle - HIV-1	2
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03430	Mismatch repair	2
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	4
bdi03040	Spliceosome	2
bdi03022	Basal transcription factors	2

Expression

Expression pattern

Entrez Gene ID^*

18103075

18106812

7470250

100776402

100796442

100808644

25493075

834648

103839631

103827759

100257282

107925146

107901894

107962253

106436370

111209807

106367638

102607199

101250056

101263779

102581173

102585771

107811166

107826318

107760512

4339613

4329117

103631635

100193950

100272243

123145793

123183089

123068170

123450220

8081657

8063593

100834701

100830531

5724326

5721477

5719812

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	1	1	2	1	3	3	1	2	2	3	2	3	3	1	2	2	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18103075 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18103075 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**