ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18103077	glutaredoxin-C9
ppo-r.4	18103077	glutaredoxin-C9
ppo-u.5	7491720	glutaredoxin-C9
ppo-u.5	18106817	glutaredoxin-C9
gma-u.5	100818445	glutaredoxin-C9
gma-u.5	100809924	glutaredoxin-C9
gma-u.5	100792704	glutaredoxin-like family protein
mtr-u.5	11446676	glutaredoxin-C9
mtr-u.5	25487713	monothiol glutaredoxin-S9
mtr-u.5	11441825	glutaredoxin-C9
ath-u.5	GRX480	Thioredoxin superfamily protein
bra-r.6	103838948	glutaredoxin-C9
bra-r.6	103829006	glutaredoxin-C9
vvi-u.5	100247528	glutaredoxin-C9
vvi-u.5	100255569	glutaredoxin-C9
vvi-u.5	104878168	monothiol glutaredoxin-S5
ghi-r.1	121208559	glutaredoxin-C9
ghi-r.1	107924957	glutaredoxin-C9
ghi-r.1	107909496	glutaredoxin-C9
bna-r.1	106356342	glutaredoxin-C9
bna-r.1	106395072	glutaredoxin-C9-like
bna-r.1	106422027	glutaredoxin-C9
cit-r.1	102622324	glutaredoxin-C9-like
cit-r.1	102606911	glutaredoxin-C9
sly-u.5	101250342	glutaredoxin-C9-like
sly-u.5	101255509	glutaredoxin-C9
sly-u.5	GRXS25	glutaredoxin GrxS25
sot-r.1	102595060	glutaredoxin-C9
sot-r.1	102589662	glutaredoxin-C9-like
sot-r.1	102593125	glutaredoxin-C9-like
nta-r.1	107794617	glutaredoxin-C9
nta-r.1	107800971	glutaredoxin-C9-like
osa-u.5	4326324	monothiol glutaredoxin-S5-like
osa-u.5	9269297	monothiol glutaredoxin-S9-like
zma-u.5	100281023	Grx_I1 - glutaredoxin subgroup III
zma-u.5	100281053	uncharacterized LOC100281053
zma-u.5	100285691	Grx_I1 - glutaredoxin subgroup III
tae-r.2	123068215	monothiol glutaredoxin-S9
tae-r.2	123065513	monothiol glutaredoxin-S5
tae-r.2	123074613	monothiol glutaredoxin-S5
hvu-r.1	123419566	monothiol glutaredoxin-S9-like
hvu-r.1	123402754	monothiol glutaredoxin-S9-like
hvu-r.1	123419580	monothiol glutaredoxin-S9-like
sbi-r.1	8063596	monothiol glutaredoxin-S9
sbi-r.1	8080824	monothiol glutaredoxin-S5
bdi-r.1	100828393	monothiol glutaredoxin-S5
bdi-r.1	104582590	monothiol glutaredoxin-S9

Top 50 coexpressed genes to 18103077 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18103077 (ppo-u.5 coexpression data)

CoexMap""

[Cytoscape]

Annotation

functional annotation

Function

glutaredoxin-C9

KEGG

GO BP

GO CC

GO MF

Protein

XP_006377423.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 1, nucl 1, cyto 1, cyto_nucl 1

(predict for XP_006377423.1)

Subcellular
localization
TargetP

chlo 4, mito 4

(predict for XP_006377423.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18103077	ppo-r.4 for 18103077	ppo-u.5 for 7491720	ppo-u.5 for 18106817	gma-u.5 for 100818445	gma-u.5 for 100809924	gma-u.5 for 100792704	mtr-u.5 for 11446676	mtr-u.5 for 25487713	mtr-u.5 for 11441825	ath-u.5 for GRX480	bra-r.6 for 103838948	bra-r.6 for 103829006	vvi-u.5 for 100247528	vvi-u.5 for 100255569	vvi-u.5 for 104878168	ghi-r.1 for 121208559	ghi-r.1 for 107924957	ghi-r.1 for 107909496	bna-r.1 for 106356342	bna-r.1 for 106395072	bna-r.1 for 106422027	cit-r.1 for 102622324	cit-r.1 for 102606911	sly-u.5 for 101250342	sly-u.5 for 101255509	sly-u.5 for GRXS25	sot-r.1 for 102595060	sot-r.1 for 102589662	sot-r.1 for 102593125	nta-r.1 for 107794617	nta-r.1 for 107800971	osa-u.5 for 4326324	osa-u.5 for 9269297	zma-u.5 for 100281023	zma-u.5 for 100281053	zma-u.5 for 100285691	tae-r.2 for 123068215	tae-r.2 for 123065513	tae-r.2 for 123074613	hvu-r.1 for 123419566	hvu-r.1 for 123402754	hvu-r.1 for 123419580	sbi-r.1 for 8063596	sbi-r.1 for 8080824	bdi-r.1 for 100828393	bdi-r.1 for 104582590

Please wait a moment.

Ortholog

Ortholog ID: 1644

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GRX480

GRXS25

Function^*

glutaredoxin-C9

uncharacterized LOC100527118

thioredoxin-like superfamily protein

glutaredoxin-C9

monothiol glutaredoxin-S9

glutaredoxin-C9

Thioredoxin superfamily protein

glutaredoxin-C9

monothiol glutaredoxin-S5

glutaredoxin-C9

glutaredoxin-C9-like

glutaredoxin-C9

glutaredoxin-C9-like

glutaredoxin-C9

glutaredoxin GrxS25

glutaredoxin-C9

glutaredoxin-C9-like

monothiol glutaredoxin-S5-like

monothiol glutaredoxin-S9-like

Grx_I1 - glutaredoxin subgroup III

uncharacterized LOC100281053

monothiol glutaredoxin-S9

monothiol glutaredoxin-S5

monothiol glutaredoxin-S9-like

monothiol glutaredoxin-S9

monothiol glutaredoxin-S5

monothiol glutaredoxin-S9

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	4
mtr04016	MAPK signaling pathway - plant	2
mtr00380	Tryptophan metabolism	2
mtr00966	Glucosinolate biosynthesis	2
mtr01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	5
ath00592	alpha-Linolenic acid metabolism	4
ath00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	3
vvi04075	Plant hormone signal transduction	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00360	Phenylalanine metabolism	3
cit00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly00360	Phenylalanine metabolism	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2
sot00380	Tryptophan metabolism	2
sot00966	Glucosinolate biosynthesis	2
sot01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	3
nta00380	Tryptophan metabolism	2
nta00966	Glucosinolate biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	3
bdi04075	Plant hormone signal transduction	2
bdi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

18103077

7491720

100818445

100527118

100306716

11446676

25487713

11441825

839748

103838948

103829006

100247528

100255569

104878168

107909496

107941727

121229403

106356342

106422027

106435101

102622324

102606911

101250342

101255509

101267563

102595060

102589662

102593125

107824647

142177548

4326324

9269297

100281023

100281053

103630730

123098907

123058447

123402754

8063596

8080824

100828393

104582590

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	1	2	3	3	3	2	3	3	2	2	3	3	3	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18103077 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18103077 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**