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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18094279   pumilio homolog 12 
 gma-u.5   100817064   pumilio homolog 2 
 gma-u.5   100780898   putative pumilio homolog 7, chloroplastic 
 vvi-u.5   100854713   putative pumilio homolog 8, chloroplastic 
 vvi-u.5   100250413   uncharacterized LOC100250413 
 vvi-u.5   100266352   putative pumilio homolog 7, chloroplastic 
 sly-u.5   101252807   pumilio homolog 12 
 sly-u.5   101265233   pumilio homolog 9-like 
 sly-u.5   101256482   pumilio homolog 12-like 
 osa-u.5   4352254   putative pumilio homolog 7, chloroplastic 
 zma-u.5   100192099   uncharacterized LOC100192099 
 zma-u.5   100193627   Pumilio homolog 12 

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Top 50 coexpressed genes to 18094279 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18094279 (ppo-u.5 coexpression data)

CoexMap"18104815"


ppoLOC18104815 | Entrez gene ID : 18104815    
Species ppo gma vvi sly osa zma bdi mtr bra hvu cit bna ath sbi ghi sot nta cre tae
Paralog 1 2 3 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010608 [list] [network] post-transcriptional regulation of gene expression  (142 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_006374852.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 2,  golg_plas 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_006374852.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_006374852.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18094279
gma-u.5
for
100817064
gma-u.5
for
100780898
vvi-u.5
for
100854713
vvi-u.5
for
100250413
vvi-u.5
for
100266352
sly-u.5
for
101252807
sly-u.5
for
101265233
sly-u.5
for
101256482
osa-u.5
for
4352254
zma-u.5
for
100192099
zma-u.5
for
100193627


Ortholog ID: 1152
Species ppo gma bra vvi vvi ghi ghi bna bna cit cit sly sly sot nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC18097226 LOC100799294 LOC103840015 LOC100250413 LOC100248421 LOC107901455 LOC107952173 LOC106423812 LOC106385669 LOC102614027 LOC102610670 LOC101256482 LOC101265233 LOC102582821 LOC107825154 LOC4352254 LOC100193627 LOC100192099 LOC123110969 LOC123102784 LOC123398983 LOC8064078 LOC100829831 CHLRE_12g544700v5
Function* pumilio homolog 12 pumilio homolog 1 pumilio homolog 9-like uncharacterized LOC100250413 pumilio homolog 12 putative pumilio homolog 7, chloroplastic pumilio homolog 12 putative pumilio homolog 7, chloroplastic pumilio homolog 12-like putative pumilio homolog 7, chloroplastic putative pumilio homolog 7, chloroplastic pumilio homolog 12-like pumilio homolog 9-like pumilio homolog 12-like putative pumilio homolog 8, chloroplastic putative pumilio homolog 7, chloroplastic Pumilio homolog 12 uncharacterized LOC100192099 putative pumilio homolog 7, chloroplastic putative pumilio homolog 7, chloroplastic putative pumilio homolog 8, chloroplastic uncharacterized LOC8064078 putative pumilio homolog 8, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta00073 Cutin, suberine and wax biosynthesis 4
nta00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 18097226 100799294 103840015 100250413 100248421 107901455 107952173 106423812 106385669 102614027 102610670 101256482 101265233 102582821 107825154 4352254 100193627 100192099 123110969 123102784 123398983 8064078 100829831 5719561
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