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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8064078   uncharacterized LOC8064078 
 zma-u.5   100192099   uncharacterized LOC100192099 
 zma-u.5   100193627   Pumilio homolog 12 
 osa-u.5   4352254   putative pumilio homolog 7, chloroplastic 
 gma-u.5   100817064   pumilio homolog 2 
 gma-u.5   100780898   putative pumilio homolog 7, chloroplastic 
 sly-u.5   101252807   pumilio homolog 12 
 sly-u.5   101265233   pumilio homolog 9-like 
 sly-u.5   101256482   pumilio homolog 12-like 
 vvi-u.5   100854713   putative pumilio homolog 8, chloroplastic 
 vvi-u.5   100250413   uncharacterized LOC100250413 
 vvi-u.5   100266352   putative pumilio homolog 7, chloroplastic 
 ppo-u.5   18097226   pumilio homolog 12 

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Top 50 coexpressed genes to 8064078 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8064078 (sbi-r.1 coexpression data)

CoexMap"8064078"


sbiLOC8064078 | Entrez gene ID : 8064078      
Species sbi zma osa gma sly vvi ppo bra nta mtr cre hvu cit bdi sot tae ath bna ghi
Paralog 1 2 1 2 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010608 [list] [network] post-transcriptional regulation of gene expression  (120 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (267 genes)  IEA  
Protein XP_002443195.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  plas 1  (predict for XP_002443195.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002443195.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8064078

.
zma-u.5
for
100192099

.
zma-u.5
for
100193627

.
osa-u.5
for
4352254

.
gma-u.5
for
100817064

.
gma-u.5
for
100780898

.
sly-u.5
for
101252807

.
sly-u.5
for
101265233

.
sly-u.5
for
101256482

.
vvi-u.5
for
100854713

.
vvi-u.5
for
100250413

.
vvi-u.5
for
100266352

.
ppo-u.5
for
18097226

.


Ortholog ID: 1152
Species gma sly sly osa zma zma bra vvi vvi ppo tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta
Symbol LOC100799294 LOC101256482 LOC101265233 LOC4352254 LOC100193627 LOC100192099 LOC103840015 LOC100250413 LOC100248421 LOC18097226 LOC123110969 LOC123102784 LOC123398983 LOC107901455 LOC107952173 LOC106423812 LOC106385669 CHLRE_12g544700v5 LOC8064078 LOC102582821 LOC102614027 LOC102610670 LOC100829831 LOC107825154
Function* pumilio homolog 1 pumilio homolog 12-like pumilio homolog 9-like putative pumilio homolog 7, chloroplastic Pumilio homolog 12 uncharacterized LOC100192099 pumilio homolog 9-like uncharacterized LOC100250413 pumilio homolog 12 pumilio homolog 12 putative pumilio homolog 7, chloroplastic putative pumilio homolog 7, chloroplastic putative pumilio homolog 8, chloroplastic putative pumilio homolog 7, chloroplastic pumilio homolog 12 putative pumilio homolog 7, chloroplastic pumilio homolog 12-like uncharacterized protein uncharacterized LOC8064078 pumilio homolog 12-like putative pumilio homolog 7, chloroplastic putative pumilio homolog 7, chloroplastic putative pumilio homolog 8, chloroplastic putative pumilio homolog 8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta00073 Cutin, suberine and wax biosynthesis 4
nta00908 Zeatin biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100799294 101256482 101265233 4352254 100193627 100192099 103840015 100250413 100248421 18097226 123110969 123102784 123398983 107901455 107952173 106423812 106385669 5719561 8064078 102582821 102614027 102610670 100829831 107825154
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