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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7461709   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100499972   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100786595   uncharacterized LOC100786595 
 mtr-u.5   25491617   protein GRAVITROPIC IN THE LIGHT 1 
 ath-u.5   AT2G45260   myosin-4 protein (DUF641) 
 vvi-u.5   100250526   protein GRAVITROPIC IN THE LIGHT 1 
 sly-u.5   101248815   protein GRAVITROPIC IN THE LIGHT 1 
 osa-u.5   4348500   protein GRAVITROPIC IN THE LIGHT 1 
 zma-u.5   100277294   uncharacterized LOC100277294 
 zma-u.5   100384457   uncharacterized LOC100384457 

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Top 50 coexpressed genes to 7461709 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461709 (ppo-u.5 coexpression data)

CoexMap"18105203"


ppoLOC18105203 | Entrez gene ID : 18105203    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009959 [list] [network] negative gravitropism  (13 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (47 genes)  IEA  
GO CC
GO MF
Protein XP_024440248.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  pero 1  (predict for XP_024440248.2)
Subcellular
localization
TargetP
other 9  (predict for XP_024440248.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7461709

.
gma-u.5
for
100499972

.
gma-u.5
for
100786595

.
mtr-u.5
for
25491617

.
ath-u.5
for
AT2G45260

.
vvi-u.5
for
100250526

.
sly-u.5
for
101248815

.
osa-u.5
for
4348500

.
zma-u.5
for
100277294

.
zma-u.5
for
100384457

.


Ortholog ID: 5490
Species gma gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol LOC100499972 LOC100786595 LOC101248815 LOC4348500 LOC100277294 LOC100384457 LOC103866868 LOC103858169 LOC100250526 LOC7461709 LOC25491617 LOC123127301 LOC123086360 LOC123401813 LOC123448166 LOC107941757 LOC107911588 LOC106438247 LOC106429589 LOC8079968 LOC8070322 LOC102602829 LOC102618291 LOC100825831 LOC107770141 LOC107764557
Function* protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC100786595 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC100277294 uncharacterized LOC100384457 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 IRK-interacting protein IRK-interacting protein IRK-interacting protein protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly04141 Protein processing in endoplasmic reticulum 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra04382 Cornified envelope formation 4
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra04517 IgSF CAM signaling 4
bra04814 Motor proteins 4
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
sot03082 ATP-dependent chromatin remodeling 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100499972 100786595 101248815 4348500 100277294 100384457 103866868 103858169 100250526 7461709 25491617 123127301 123086360 123401813 123448166 107941757 107911588 106438247 106429589 8079968 8070322 102602829 102618291 100825831 107770141 107764557
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