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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25491617   protein GRAVITROPIC IN THE LIGHT 1 
 mtr-r.5   25491617   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100499972   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100786595   uncharacterized LOC100786595 
 ppo-u.5   7461709   protein GRAVITROPIC IN THE LIGHT 1 
 ath-u.5   AT2G45260   myosin-4 protein (DUF641) 
 bra-r.6   103866868   protein GRAVITROPIC IN THE LIGHT 1 
 bra-r.6   103858169   protein GRAVITROPIC IN THE LIGHT 1 
 vvi-u.5   100250526   protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1   121202907   protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1   107900841   protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1   107911588   protein GRAVITROPIC IN THE LIGHT 1 
 bna-r.1   106438247   protein GRAVITROPIC IN THE LIGHT 1-like 
 bna-r.1   106396354   protein GRAVITROPIC IN THE LIGHT 1 
 bna-r.1   106429589   protein GRAVITROPIC IN THE LIGHT 1 
 cit-r.1   102618291   protein GRAVITROPIC IN THE LIGHT 1 
 sly-u.5   101248815   protein GRAVITROPIC IN THE LIGHT 1 
 sot-r.1   102602829   IRK-interacting protein 
 nta-r.1   107764557   protein GRAVITROPIC IN THE LIGHT 1-like 
 nta-r.1   107770141   protein GRAVITROPIC IN THE LIGHT 1 
 osa-u.5   4348500   protein GRAVITROPIC IN THE LIGHT 1 
 zma-u.5   100277294   uncharacterized LOC100277294 
 zma-u.5   100384457   uncharacterized LOC100384457 
 tae-r.2   123086360   protein GRAVITROPIC IN THE LIGHT 1 
 tae-r.2   123091684   protein GRAVITROPIC IN THE LIGHT 1 
 tae-r.2   123127301   protein GRAVITROPIC IN THE LIGHT 1 
 hvu-r.1   123401813   protein GRAVITROPIC IN THE LIGHT 1-like 
 hvu-r.1   123448166   protein GRAVITROPIC IN THE LIGHT 1-like 
 sbi-r.1   8070322   IRK-interacting protein 
 sbi-r.1   8079968   IRK-interacting protein 
 bdi-r.1   100825831   protein GRAVITROPIC IN THE LIGHT 1 

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Top 50 coexpressed genes to 25491617 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25491617 (mtr-u.5 coexpression data)

CoexMap"25491617"


mtrLOC25491617 | Entrez gene ID : 25491617      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 1 1 2 1 3 3 1 1 1 2 1 2 3 2 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009959 [list] [network] negative gravitropism  (8 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (29 genes)  IEA  
GO CC
GO MF
Protein XP_013455059.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_013455059.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013455059.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25491617
mtr-r.5
for
25491617
gma-u.5
for
100499972
gma-u.5
for
100786595
ppo-u.5
for
7461709
ath-u.5
for
AT2G45260
bra-r.6
for
103866868
bra-r.6
for
103858169
vvi-u.5
for
100250526
ghi-r.1
for
121202907
ghi-r.1
for
107900841
ghi-r.1
for
107911588
bna-r.1
for
106438247
bna-r.1
for
106396354
bna-r.1
for
106429589
cit-r.1
for
102618291
sly-u.5
for
101248815
sot-r.1
for
102602829
nta-r.1
for
107764557
nta-r.1
for
107770141
osa-u.5
for
4348500
zma-u.5
for
100277294
zma-u.5
for
100384457
tae-r.2
for
123086360
tae-r.2
for
123091684
tae-r.2
for
123127301
hvu-r.1
for
123401813
hvu-r.1
for
123448166
sbi-r.1
for
8070322
sbi-r.1
for
8079968
bdi-r.1
for
100825831


Ortholog ID: 5490
Species mtr gma gma ppo bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi
Symbol LOC25491617 LOC100499972 LOC100786595 LOC7461709 LOC103866868 LOC103858169 LOC100250526 LOC107900841 LOC107911588 LOC107941757 LOC106438247 LOC106396354 LOC106429589 LOC102618291 LOC101248815 LOC102602829 LOC107764557 LOC107770141 LOC4348500 LOC100277294 LOC100384457 LOC123086360 LOC123127301 LOC123144385 LOC123401813 LOC123448166 LOC8070322 LOC8079968 LOC100825831
Function* protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC100786595 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 IRK-interacting protein protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 uncharacterized LOC100277294 uncharacterized LOC100384457 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1-like IRK-interacting protein IRK-interacting protein protein GRAVITROPIC IN THE LIGHT 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 4
bra04382 Cornified envelope formation 4
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 4
bra04517 IgSF CAM signaling 4
bra04814 Motor proteins 4
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00650 Butanoate metabolism 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly04141 Protein processing in endoplasmic reticulum 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
sot03082 ATP-dependent chromatin remodeling 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25491617 100499972 100786595 7461709 103866868 103858169 100250526 107900841 107911588 107941757 106438247 106396354 106429589 102618291 101248815 102602829 107764557 107770141 4348500 100277294 100384457 123086360 123127301 123144385 123401813 123448166 8070322 8079968 100825831
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