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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18105378   protein FAR1-RELATED SEQUENCE 2 
 ppo-r.4   18105378   protein FAR1-RELATED SEQUENCE 2 
 ppo-u.5   112323250   protein FAR-RED ELONGATED HYPOCOTYL 3 
 ppo-u.5   7469585   protein FAR1-RELATED SEQUENCE 12 
 ppo-u.5   7462455   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100813124   protein FAR1-RELATED SEQUENCE 5 
 gma-u.5   100777092   FAR1 DNA-binding domain-containing protein 
 gma-u.5   100780613   protein FAR1-RELATED SEQUENCE 6 
 mtr-u.5   112416292   protein FAR1-RELATED SEQUENCE 5 
 mtr-u.5   11430032   protein FAR1-RELATED SEQUENCE 6 
 mtr-u.5   25492669   protein FAR1-RELATED SEQUENCE 7 
 ath-u.5   AT2G43280   Far-red impaired responsive (FAR1) family protein 
 ath-u.5   AT3G07500   Far-red impaired responsive (FAR1) family protein 
 ath-u.5   AT3G59470   Far-red impaired responsive (FAR1) family protein 
 vvi-u.5   100262716   protein FAR1-RELATED SEQUENCE 5 
 vvi-u.5   100250990   protein FAR1-RELATED SEQUENCE 7 
 sly-u.5   101265766   protein FAR1-RELATED SEQUENCE 7 
 sly-u.5   101254807   protein FAR1-RELATED SEQUENCE 5 
 sly-u.5   101254499   protein FAR1-RELATED SEQUENCE 2-like 
 osa-u.5   4332292   uncharacterized LOC4332292 

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Top 50 coexpressed genes to 18105378 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18105378 (ppo-u.5 coexpression data)

CoexMap"18105378"


ppoLOC18105378 | Entrez gene ID : 18105378    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 5 3 3 3 2 3 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_024441354.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_024441354.1)
Subcellular
localization
TargetP
other 9  (predict for XP_024441354.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18105378

.
ppo-r.4
for
18105378

.
ppo-u.5
for
112323250

.
ppo-u.5
for
7469585

.
ppo-u.5
for
7462455

.
gma-u.5
for
100813124

.
gma-u.5
for
100777092

.
gma-u.5
for
100780613

.
mtr-u.5
for
112416292

.
mtr-u.5
for
11430032

.
mtr-u.5
for
25492669

.
ath-u.5
for
AT2G43280

.
ath-u.5
for
AT3G07500

.
ath-u.5
for
AT3G59470

.
vvi-u.5
for
100262716

.
vvi-u.5
for
100250990

.
sly-u.5
for
101265766

.
sly-u.5
for
101254807

.
sly-u.5
for
101254499

.
osa-u.5
for
4332292

.


Ortholog ID: 810
Species ath ath gma gma sly osa bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT4G12850 AT3G59470 LOC100787741 LOC100810283 LOC101254499 LOC4332292 LOC103830214 LOC100248330 LOC7469585 LOC112416292 LOC25488459 LOC123085322 LOC123098017 LOC123449117 LOC107926016 LOC107910164 LOC106402848 LOC111208488 LOC8078835 LOC102600025 LOC102624315 LOC102618974 LOC100841807 LOC107830790 LOC107830791
Function* Far-red impaired responsive (FAR1) family protein Far-red impaired responsive (FAR1) family protein protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 2-like uncharacterized LOC4332292 protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 2 uncharacterized LOC123085322 uncharacterized LOC123098017 uncharacterized LOC123449117 protein FAR1-RELATED SEQUENCE 5 protein FAR1-RELATED SEQUENCE 12 protein FAR1-RELATED SEQUENCE 6-like protein FAR1-RELATED SEQUENCE 6-like uncharacterized LOC8078835 protein FAR1-RELATED SEQUENCE 2-like protein FAR1-RELATED SEQUENCE 6 protein FAR1-RELATED SEQUENCE 1 uncharacterized LOC100841807 uncharacterized LOC107830790 uncharacterized LOC107830791
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 3
osa01212 Fatty acid metabolism 3
osa00280 Valine, leucine and isoleucine degradation 2
osa00592 alpha-Linolenic acid metabolism 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00240 Pyrimidine metabolism 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826897 825116 100787741 100810283 101254499 4332292 103830214 100248330 7469585 112416292 25488459 123085322 123098017 123449117 107926016 107910164 106402848 111208488 8078835 102600025 102624315 102618974 100841807 107830790 107830791
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