ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18108590	protein STRUBBELIG-RECEPTOR FAMILY 3
ppo-r.4	18108590	protein STRUBBELIG-RECEPTOR FAMILY 3
ppo-u.5	7490803	protein STRUBBELIG-RECEPTOR FAMILY 3
ppo-u.5	7485574	protein STRUBBELIG-RECEPTOR FAMILY 3
ppo-u.5	7497390	protein STRUBBELIG-RECEPTOR FAMILY 3
gma-u.5	100499627	LRR receptor-like kinase
gma-u.5	100793423	protein STRUBBELIG-RECEPTOR FAMILY 3
gma-u.5	100794130	protein STRUBBELIG-RECEPTOR FAMILY 3
mtr-u.5	25492087	protein STRUBBELIG-RECEPTOR FAMILY 3
mtr-u.5	11425153	protein STRUBBELIG-RECEPTOR FAMILY 3
mtr-u.5	25487613	protein STRUBBELIG-RECEPTOR FAMILY 3
ath-u.5	SRF1	STRUBBELIG-receptor family 1
ath-u.5	SRF3	STRUBBELIG-receptor family 3
bra-r.6	103846682	protein STRUBBELIG-RECEPTOR FAMILY 3
bra-r.6	103858699	protein STRUBBELIG-RECEPTOR FAMILY 3
vvi-u.5	100248332	protein STRUBBELIG-RECEPTOR FAMILY 3
vvi-u.5	100247008	protein STRUBBELIG-RECEPTOR FAMILY 1
ghi-r.1	107925321	protein STRUBBELIG-RECEPTOR FAMILY 3
ghi-r.1	107937744	protein STRUBBELIG-RECEPTOR FAMILY 3
ghi-r.1	107886750	protein STRUBBELIG-RECEPTOR FAMILY 3
bna-r.1	106438732	protein STRUBBELIG-RECEPTOR FAMILY 3-like
bna-r.1	125577673	protein STRUBBELIG-RECEPTOR FAMILY 3-like
bna-r.1	106435145	protein STRUBBELIG-RECEPTOR FAMILY 3-like
cit-r.1	102618863	protein STRUBBELIG
cit-r.1	102612239	protein STRUBBELIG-RECEPTOR FAMILY 3
sly-u.5	101259169	protein STRUBBELIG-RECEPTOR FAMILY 3-like
sly-u.5	101261873	protein STRUBBELIG-RECEPTOR FAMILY 3
sly-u.5	101255469	protein STRUBBELIG-RECEPTOR FAMILY 3
sot-r.1	102578974	protein STRUBBELIG-RECEPTOR FAMILY 3
sot-r.1	102604626	protein STRUBBELIG-RECEPTOR FAMILY 3
sot-r.1	102577903	LRR receptor-like kinase
nta-r.1	107817429	protein STRUBBELIG-RECEPTOR FAMILY 3-like
nta-r.1	107821255	protein STRUBBELIG-RECEPTOR FAMILY 3
nta-r.1	107790163	protein STRUBBELIG-RECEPTOR FAMILY 3
osa-u.5	4341741	protein STRUBBELIG-RECEPTOR FAMILY 3
osa-u.5	4343624	protein STRUBBELIG-RECEPTOR FAMILY 3
osa-u.5	4328477	protein STRUBBELIG-RECEPTOR FAMILY 3
zma-u.5	100273714	uncharacterized LOC100273714
zma-u.5	103629681	protein STRUBBELIG-RECEPTOR FAMILY 3
zma-u.5	100383536	putative STRUBBELIG family receptor protein kinase
tae-r.2	123144116	protein STRUBBELIG-RECEPTOR FAMILY 3
tae-r.2	123044528	protein STRUBBELIG-RECEPTOR FAMILY 3
tae-r.2	123188236	protein STRUBBELIG-RECEPTOR FAMILY 3
hvu-r.1	123425675	protein STRUBBELIG-RECEPTOR FAMILY 3-like
hvu-r.1	123401201	protein STRUBBELIG-RECEPTOR FAMILY 3-like
hvu-r.1	123409827	protein STRUBBELIG-RECEPTOR FAMILY 3-like
sbi-r.1	8076132	protein STRUBBELIG-RECEPTOR FAMILY 3
sbi-r.1	110432378	protein STRUBBELIG-RECEPTOR FAMILY 3-like
sbi-r.1	8061570	protein STRUBBELIG-RECEPTOR FAMILY 3
bdi-r.1	100843136	protein STRUBBELIG-RECEPTOR FAMILY 3
bdi-r.1	100823170	protein STRUBBELIG-RECEPTOR FAMILY 3
bdi-r.1	100836091	protein STRUBBELIG-RECEPTOR FAMILY 3

Top 50 coexpressed genes to 18108590 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18108590 (ppo-u.5 coexpression data)

CoexMap"18108590"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1496 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(1543 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA
GO:0005515 [list] [network] protein binding	(4916 genes)	IEA

Protein

XP_052305608.1 [sequence] [blastp]
XP_052305609.1 [sequence] [blastp]
XP_052305610.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 1, nucl 1, mito 1, vacu 1, pero 1, cyto_E.R. 1	(predict for XP_052305608.1)
plas 5, E.R. 1, chlo 1, nucl 1, mito 1, vacu 1, pero 1, chlo_mito 1, cyto_E.R. 1	(predict for XP_052305609.1)
chlo 4, nucl 1, vacu 1, cysk_nucl 1, mito 1, plas 1, extr 1, E.R._vacu 1, mito_plas 1	(predict for XP_052305610.1)

Subcellular
localization
TargetP

other 5, mito 3	(predict for XP_052305608.1)
other 5, mito 3	(predict for XP_052305609.1)
other 5, chlo 4	(predict for XP_052305610.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18108590	ppo-r.4 for 18108590	ppo-u.5 for 7490803	ppo-u.5 for 7485574	ppo-u.5 for 7497390	gma-u.5 for 100499627	gma-u.5 for 100793423	gma-u.5 for 100794130	mtr-u.5 for 25492087	mtr-u.5 for 11425153	mtr-u.5 for 25487613	ath-u.5 for SRF1	ath-u.5 for SRF3	bra-r.6 for 103846682	bra-r.6 for 103858699	vvi-u.5 for 100248332	vvi-u.5 for 100247008	ghi-r.1 for 107925321	ghi-r.1 for 107937744	ghi-r.1 for 107886750	bna-r.1 for 106438732	bna-r.1 for 125577673	bna-r.1 for 106435145	cit-r.1 for 102618863	cit-r.1 for 102612239	sly-u.5 for 101259169	sly-u.5 for 101261873	sly-u.5 for 101255469	sot-r.1 for 102578974	sot-r.1 for 102604626	sot-r.1 for 102577903	nta-r.1 for 107817429	nta-r.1 for 107821255	nta-r.1 for 107790163	osa-u.5 for 4341741	osa-u.5 for 4343624	osa-u.5 for 4328477	zma-u.5 for 100273714	zma-u.5 for 103629681	zma-u.5 for 100383536	tae-r.2 for 123144116	tae-r.2 for 123044528	tae-r.2 for 123188236	hvu-r.1 for 123425675	hvu-r.1 for 123401201	hvu-r.1 for 123409827	sbi-r.1 for 8076132	sbi-r.1 for 110432378	sbi-r.1 for 8061570	bdi-r.1 for 100843136	bdi-r.1 for 100823170	bdi-r.1 for 100836091

Ortholog

Ortholog ID: 1907

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SRF1

SRF3

Function^*