ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	18111250	uncharacterized LOC18111250
ppo-r.4	18111250	uncharacterized LOC18111250
gma-u.5	102661544	uncharacterized LOC102661544
gma-u.5	100794351	uncharacterized LOC100794351
mtr-u.5	120578139	uncharacterized LOC120578139
mtr-u.5	25486158	uncharacterized LOC25486158
ath-u.5	DUO3	Homeodomain-like superfamily protein
vvi-u.5	100247051	uncharacterized LOC100247051
sly-u.5	101249932	uncharacterized LOC101249932
osa-u.5	4333696	uncharacterized LOC4333696
zma-u.5	103632633	uncharacterized LOC103632633

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1948 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

GO:0003712 [list] [network] transcription coregulator activity

(154 genes)

IEA

Protein

XP_024436709.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_024436709.1)

Subcellular
localization
TargetP

other 8

(predict for XP_024436709.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18111250	ppo-r.4 for 18111250	gma-u.5 for 102661544	gma-u.5 for 100794351	mtr-u.5 for 120578139	mtr-u.5 for 25486158	ath-u.5 for DUO3	vvi-u.5 for 100247051	sly-u.5 for 101249932	osa-u.5 for 4333696	zma-u.5 for 103632633

Ortholog ID: 8290

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

DUO3

Function^*

uncharacterized LOC18111250

uncharacterized LOC102661544

uncharacterized LOC100794351

uncharacterized LOC25486158

uncharacterized LOC120578139

Homeodomain-like superfamily protein

uncharacterized LOC103838173

uncharacterized LOC100247051

uncharacterized LOC107935383

uncharacterized LOC107925200

uncharacterized LOC106366456

uncharacterized LOC102624036

uncharacterized LOC101249932

uncharacterized LOC102596887

uncharacterized LOC107810134

uncharacterized LOC107776140

uncharacterized LOC4333696

uncharacterized LOC103632633

uncharacterized LOC123165707

uncharacterized LOC123156781

uncharacterized LOC123413037

uncharacterized LOC8054610

uncharacterized LOC8065447

uncharacterized LOC100840482

uncharacterized LOC100833724

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03083	Polycomb repressive complex	3
ath03250	Viral life cycle - HIV-1	3
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	3
bra03083	Polycomb repressive complex	2
bra03250	Viral life cycle - HIV-1	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	3
sbi03040	Spliceosome	2
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi03013	Nucleocytoplasmic transport	2

Expression

Expression pattern

Entrez Gene ID^*

18111250

102661544

100794351

25486158

120578139

842765

103838173

100247051

107935383

107925200

106366456

102624036

101249932

102596887

107810134

107776140

4333696

103632633

123165707

123156781

123413037

8054610

8065447

100840482

100833724

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 18111250 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18111250 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	2	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18111250 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18111250 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**