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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11435666   protein BREAST CANCER SUSCEPTIBILITY 2 homolog A 
 gma-u.5   100797849   BRCA2 domain-containing protein 
 ppo-u.5   7463421   protein BREAST CANCER SUSCEPTIBILITY 2 homolog B 
 ppo-u.5   7488719   uncharacterized LOC7488719 
 ath-u.5   BRCA2(IV)   BREAST CANCER 2 like 2A 
 ath-u.5   BRCA2B   BRCA2-like B 
 vvi-u.5   100241398   protein BREAST CANCER SUSCEPTIBILITY 2 homolog B 
 sly-u.5   101244820   protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like 
 osa-u.5   4324417   protein BREAST CANCER SUSCEPTIBILITY 2 homolog B 
 zma-u.5   103641455   uncharacterized LOC103641455 

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Top 50 coexpressed genes to 11435666 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11435666 (mtr-u.5 coexpression data)

CoexMap"25480600"


mtrLOC25480600 | Entrez gene ID : 25480600      
Species mtr gma ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 1 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr03440 [list] [network] Homologous recombination (67 genes)
mtr03460 [list] [network] Fanconi anemia pathway (41 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (67 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO MF
Protein XP_039690119.1 [sequence] [blastp]
XP_039690120.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_039690119.1)
nucl 9,  cyto 1  (predict for XP_039690120.1)
Subcellular
localization
TargetP
other 9  (predict for XP_039690119.1)
other 9  (predict for XP_039690120.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11435666

.
gma-u.5
for
100797849

.
ppo-u.5
for
7463421

.
ppo-u.5
for
7488719

.
ath-u.5
for
BRCA2(IV)

.
ath-u.5
for
BRCA2B

.
vvi-u.5
for
100241398

.
sly-u.5
for
101244820

.
osa-u.5
for
4324417

.
zma-u.5
for
103641455

.


Ortholog ID: 5551
Species ath ath gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sot bdi nta nta
Symbol BRCA2(IV) BRCA2B LOC100797849 LOC101244820 LOC4324417 LOC103641455 LOC103855405 LOC103868332 LOC100241398 LOC7488719 LOC7463421 LOC11435666 LOC123060247 LOC123068755 LOC123442789 LOC123442849 LOC107948956 LOC107899592 LOC106433819 LOC106427200 CHLRE_13g566900v5 LOC102591010 LOC100832537 LOC142171394 LOC142180382
Function* BREAST CANCER 2 like 2A BRCA2-like B BRCA2 domain-containing protein protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like protein BREAST CANCER SUSCEPTIBILITY 2 homolog B uncharacterized LOC103641455 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog B uncharacterized LOC7488719 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog A protein BREAST CANCER SUSCEPTIBILITY 2 homolog A uncharacterized LOC123068755 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog B uncharacterized protein protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like protein BREAST CANCER SUSCEPTIBILITY 2 homolog B protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 3
ath03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03460 Fanconi anemia pathway 4
ath03440 Homologous recombination 3
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 6
sly03430 Mismatch repair 3
sly03440 Homologous recombination 3
sly03013 Nucleocytoplasmic transport 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 3
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra04814 Motor proteins 2
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03440 Homologous recombination 4
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03440 Homologous recombination 3
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03030 DNA replication 3
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 5
ppo03410 Base excision repair 3
ppo03420 Nucleotide excision repair 3
ppo03430 Mismatch repair 3
ppo03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 7
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
hvu03010 Ribosome 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 6
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 6
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 5
bna03440 Homologous recombination 4
bna03460 Fanconi anemia pathway 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03460 Fanconi anemia pathway 4
bna03030 DNA replication 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 4
sot03030 DNA replication 4
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 6
nta03460 Fanconi anemia pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 4
nta03460 Fanconi anemia pathway 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828230 831710 100797849 101244820 4324417 103641455 103855405 103868332 100241398 7488719 7463421 11435666 123060247 123068755 123442789 123442849 107948956 107899592 106433819 106427200 5719065 102591010 100832537 142171394 142180382
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